MCA_02113_1

Browser: contigB:271616-272739-

RNA-seq: read pairs 3536, FPKM 123.4, percentile rank 82.2% (100% = highest expression)

Protein alignments

Mitochondrial localization by mitoprotII

Probability of mitochondrial location: 0.0087

Protein family membership

None predicted.

Domains and repeats

Detailed signature matches

no IPR

Unintegrated signatures

1. CYTOPLASMIC_D... (C...)
   26 - 353

   PHOBIUS
   CYTOPLASMIC_DOMAIN (Cytoplasmic domain)
2. NON_CYTOPLASM... (N...)
   1 - 5

   PHOBIUS
   NON_CYTOPLASMIC_DOMAIN (Non cytoplasmic domain)
3. TMhelix
   4 - 26

   TMHMM
   TMhelix (TMhelix)
4. TRANSMEMBRANE (Tran...)
   6 - 25

   PHOBIUS
   TRANSMEMBRANE (Transmembrane region)
5. mobidb-lite (disord...)
   244 - 303

   MobiDB Lite
   mobidb-lite (disorder_prediction)

   69 - 139

   MobiDB Lite
   mobidb-lite (disorder_prediction)

   157 - 232

   MobiDB Lite
   mobidb-lite (disorder_prediction)

Protein sequence

>MCA_02113_1
MPVYIPYVIGLSAACAVGTIAFLTNNPELTREARRKMEEELKKFQENFRKALHPIHELGCDDYDEYEPSSSFYDAHTPPE
PNRHSSVDDNAPPLPERPAEYIFGESQSSSVPQKPELRKRNPHSKDEEDDDIEGDLYIKKGPRILENIPLEYLEKEVERR
KNINPFDPLESSLSTIRDPQKVFASQISSEDNSKTPSSDFADTPPPLPPRVPIENEDEYVPNFSTKPFSPSVISTTSSWQ
SLKEWDDNKKPSNSQNTSEKENLAASQSSTSSKSNALFETPSESPSASFTAHRNWSNQNNTPSRLDMNLIDEFTSIGSES
DILTPTISEFSAVESNGDFFDLTSSVNQHQKNI

GO term prediction