MCA_02095_1

Browser: contigB:218051-218894-

RNA-seq: read pairs 112, FPKM 5.3, percentile rank 18.1% (100% = highest expression)

Protein alignments

Mitochondrial localization by mitoprotII

Probability of mitochondrial location: 0.0932

Protein family membership

None predicted.

Domains and repeats

Detailed signature matches

no IPR

Unintegrated signatures

1. Coil
   219 - 239

   COILS
   Coil (Coil)
2. NON_CYTOPLASM... (N...)
   23 - 258

   PHOBIUS
   NON_CYTOPLASMIC_DOMAIN (Non cytoplasmic domain)
3. SIGNAL_PEPTIDE (Sig...)
   1 - 22

   PHOBIUS
   SIGNAL_PEPTIDE (Signal Peptide)
4. SIGNAL_PEPTID... (S...)
   19 - 22

   PHOBIUS
   SIGNAL_PEPTIDE_C_REGION (Signal peptide C-region)
5. SIGNAL_PEPTID... (S...)
   3 - 18

   PHOBIUS
   SIGNAL_PEPTIDE_H_REGION (Signal peptide H-region)
6. SIGNAL_PEPTID... (S...)
   1 - 2

   PHOBIUS
   SIGNAL_PEPTIDE_N_REGION (Signal peptide N-region)
7. TMhelix
   4 - 26

   TMHMM
   TMhelix (TMhelix)

Protein sequence

>MCA_02095_1
MGIFAIAFSLLAIILLLLLTIRYIIFVNDGNAFELSNEHKAHSTYSTLLMTSLPKSGNSVLKAERTFTGKNNEIINTLAI
PVQKQDSKDKVTDDQRILALIQVNKKPRVDALGEKYDVKREIQFKSELLQHERLGQLSNKSRFNIDTAKLKNLEHFAIKP
VKRFRVSINQKTPALVSYRPNSRTSITKEMVIRNVSPPNIYNTSTRKFSECIKTQLKIKKRIEKKLALSHDIKKKLEEKQ
KKWKSHLKPACFFIDIND

GO term prediction