Protein
MCA_02093_1
Length
509 amino acids
Gene name: REX3B
Description: RNA exonuclease 3
Browser: contigB:215482-217012-
RNA-seq: read pairs 329, FPKM 8.0, percentile rank 22.3% (100% = highest expression)
Protein function
| Annotation: | REX3B | RNA exonuclease 3 | |
|---|---|---|---|
| EGGNOG: | 0PG7T | REX3 | RNA exonuclease |
| SGD closest match: | S000004097 | REX3 | RNA exonuclease 3 |
| CGD closest match: | CAL0000199313 | REX3 | RNA exonuclease 3 |
Protein alignments
| %id | Aln length | E-value | ||
|---|---|---|---|---|
| MIA_05521_1 | 36.91% | 550 | 6e-111 | MIA_05521_1 |
| A0A0J9XEK5_GEOCN | 37.55% | 554 | 1e-107 | Similar to Saccharomyces cerevisiae YGR276C RNH70 3'-5' exoribonuclease OS=Geotrichum candidum GN=BN980_GECA12s02463g PE=4 SV=1 |
| UniRef50_A0A0J9XEK5 | 37.55% | 554 | 3e-104 | Similar to Saccharomyces cerevisiae YGR276C RNH70 3'-5' exoribonuclease n=1 Tax=Geotrichum candidum TaxID=1173061 RepID=A0A0J9XEK5_GEOCN |
| A0A060T6H1_BLAAD | 34.33% | 536 | 1e-92 | ARAD1C20020p OS=Blastobotrys adeninivorans GN=GNLVRS02_ARAD1C20020g PE=4 SV=1 |
| A0A167F742_9ASCO | 32.00% | 625 | 4e-87 | Rex3p OS=Sugiyamaella lignohabitans GN=REX3 PE=4 SV=1 |
| REXO3_YEAST | 38.62% | 290 | 3e-54 | RNA exonuclease 3 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=REX3 PE=1 SV=1 |
| REXO3_CANAL | 32.43% | 407 | 5e-53 | RNA exonuclease 3 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=REX3 PE=3 SV=2 |
| A0A1E4TJF6_9ASCO | 34.36% | 390 | 8e-46 | Uncharacterized protein OS=Tortispora caseinolytica NRRL Y-17796 GN=CANCADRAFT_77898 PE=4 SV=1 |
| REXO3_YARLI | 42.51% | 167 | 3e-39 | RNA exonuclease 3 OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=REX3 PE=3 SV=1 |
| A0A1E3PR59_9ASCO | 46.92% | 130 | 1e-34 | Uncharacterized protein (Fragment) OS=Nadsonia fulvescens var. elongata DSM 6958 GN=NADFUDRAFT_12998 PE=4 SV=1 |
Mitochondrial localization by mitoprotII
Probability of mitochondrial location: 0.8690
Predicted cleavage: 12
Protein family membership
None predicted.
Domains and repeats
-
Domain
1
50
100
150
200
250
300
350
400
450
509
Detailed signature matches
no IPR
Unintegrated signatures
-
-
-
mobidb-lite (disord...)
Residue annotation
-
substrate binding ...
-
active site cd06145
-
catalytic site cd0...
Protein sequence
>MCA_02093_1 MFRSTHSYFRSVSCPSITKSFRCTFHHCPYSHSSKNTTRGNNPTVKPPLKDIKNHQTTEKEKTNLASKVLLSNNRNASKP QVQAPNEKPDKPPNSNVKTVTTSPPHTNTKKRTIDFITPSSPNASSSPQVKKNDSQISLLPRPVAKGAPAPHPQRVNYVK LICKELETKNHPNPRSSAIEFEYNIAKDSSKSTYPAKIRNILLSIKKGEFSKEKKKDDQEKKDQKLKEVLNQKLKRFVAT PSKLKWYGYPGNSFKPATIPPDLSVSCKRCSTQFRINEIDNSGKCVYHSEKIRYSETHYKCCGQAKGASSGCQTSLKHVY RLEDYDMMNAIIPFVQAPEKRGTKTLYAAAIDCEMGYTTLGYELIRATIVDWETGETVWDRTIYPMGDVIDLNTRFSGVK SLEDGITDPKSGKHYATISFKKARDEMFEYISQSTILIGHGLDNDLAVLRWMHNQVVDTAIVYSSSPHNRVSLKFLVDKY LNKNFQTGQHDSSEDARATIDVLKKNFGN
GO term prediction
Biological Process
None predicted.
Molecular Function
GO:0003676 nucleic acid binding
Cellular Component
None predicted.