Protein
MCA_02092_1
Length
338 amino acids
Gene name: REX3A
Description: RNA exonuclease 3
Browser: contigB:214094-215111-
RNA-seq: read pairs 95, FPKM 3.5, percentile rank 14.7% (100% = highest expression)
Protein function
| Annotation: | REX3A | RNA exonuclease 3 | |
|---|---|---|---|
| EGGNOG: | 0PG7T | REX3 | RNA exonuclease |
| SGD closest match: | S000004097 | REX3 | RNA exonuclease 3 |
| CGD closest match: | CAL0000199313 | REX3 | RNA exonuclease 3 |
Protein alignments
| %id | Aln length | E-value | ||
|---|---|---|---|---|
| MIA_05521_1 | 42.52% | 294 | 7e-64 | MIA_05521_1 |
| A0A060T6H1_BLAAD | 39.87% | 301 | 5e-59 | ARAD1C20020p OS=Blastobotrys adeninivorans GN=GNLVRS02_ARAD1C20020g PE=4 SV=1 |
| UniRef50_A0A060T6H1 | 39.87% | 301 | 1e-55 | ARAD1C20020p n=1 Tax=Blastobotrys adeninivorans TaxID=409370 RepID=A0A060T6H1_BLAAD |
| A0A0J9XEK5_GEOCN | 41.03% | 290 | 3e-56 | Similar to Saccharomyces cerevisiae YGR276C RNH70 3'-5' exoribonuclease OS=Geotrichum candidum GN=BN980_GECA12s02463g PE=4 SV=1 |
| A0A167F742_9ASCO | 40.65% | 278 | 8e-48 | Rex3p OS=Sugiyamaella lignohabitans GN=REX3 PE=4 SV=1 |
| REXO3_CANAL | 35.16% | 310 | 6e-42 | RNA exonuclease 3 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=REX3 PE=3 SV=2 |
| REXO3_YEAST | 35.37% | 294 | 4e-39 | RNA exonuclease 3 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=REX3 PE=1 SV=1 |
| A0A1E4TJF6_9ASCO | 34.85% | 241 | 2e-37 | Uncharacterized protein OS=Tortispora caseinolytica NRRL Y-17796 GN=CANCADRAFT_77898 PE=4 SV=1 |
| REXO3_YARLI | 47.53% | 162 | 8e-33 | RNA exonuclease 3 OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=REX3 PE=3 SV=1 |
| A0A1E3PR59_9ASCO | 46.15% | 130 | 8e-26 | Uncharacterized protein (Fragment) OS=Nadsonia fulvescens var. elongata DSM 6958 GN=NADFUDRAFT_12998 PE=4 SV=1 |
Mitochondrial localization by mitoprotII
Probability of mitochondrial location: 0.1086
Protein family membership
None predicted.
Domains and repeats
-
Domain
1
50
100
150
200
250
300
338
Detailed signature matches
no IPR
Unintegrated signatures
-
mobidb-lite (disord...)
Residue annotation
-
substrate binding ...
-
active site cd06145
-
catalytic site cd0...
Protein sequence
>MCA_02092_1 MSNSQLPADDITEILDKLFGKALRLDETDEKSSPEQNSLKKIDTTSKNLVEGSTTITDSRKEEKQKKLSSLVHPNYKLED FSYLTKSIKATAYPKTQPIQCDRCKGHFFINKPNGRCVFHPYRWRNADPTFRCCGKRKWSKGCSQNDYHVFRYKEYQYLE SLIPFRETTTKKTPKTLFAAGIDCEMGYSELGYELIRLTIVDWESGNTVYDKVVHPKGKVLDLNTVFSGMVRIDEGTKDP LTGKYIGHVSFDQLWEEISEYISSSTILIGHGLENDFAVLRMIHHNVIDTCILYSLSSTRRLALKFLASKYLNREIQTGT HDSAEDAKAAIDLVNLKL
GO term prediction
Biological Process
None predicted.
Molecular Function
GO:0003676 nucleic acid binding
Cellular Component
None predicted.