Protein

MCA_02048_1

Length
221 amino acids

Gene name: EFB1

Description: Elongation factor 1-beta

Browser: contigB:97982-98847+

RNA-seq: read pairs 30115, FPKM 1676.1, percentile rank 97.6% (100% = highest expression)

Protein function

Annotation:EFB1Elongation factor 1-beta
KEGG:K03232EEF1B elongation factor 1-beta
EGGNOG:0PFG8EFB1Elongation factor
SGD closest match:S000000003EFB1Elongation factor 1-beta
CGD closest match:CAL0000176377EFB1Translation elongation factor 1 subunit beta

Protein alignments

%idAln lengthE-value
A0A060T6B1_BLAAD76.02%2212e-101ARAD1C12606p OS=Blastobotrys adeninivorans GN=GNLVRS02_ARAD1C12606g PE=3 SV=1
A0A0J9X510_GEOCN74.67%2258e-99Similar to Saccharomyces cerevisiae YAL003W EFB1 Translation elongation factor 1 beta OS=Geotrichum candidum GN=BN980_GECA03s03145g PE=3 SV=1
A0A1E3PLU9_9ASCO70.22%2257e-88Uncharacterized protein OS=Nadsonia fulvescens var. elongata DSM 6958 GN=NADFUDRAFT_82241 PE=3 SV=1
Q6C294_YARLI66.37%2234e-79YALI0F09669p OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=YALI0_F09669g PE=3 SV=1
UniRef50_A0A0S7E0U956.77%2295e-72Elongation factor 1-beta n=5 Tax=leotiomyceta TaxID=716546 RepID=A0A0S7E0U9_9EURO
MIA_05560_163.00%2277e-77MIA_05560_1
A0A1D8PM35_CANAL65.16%2211e-71Translation elongation factor 1 subunit beta OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=EFB1 PE=3 SV=1
EF1B_YEAST59.46%2229e-67Elongation factor 1-beta OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=EFB1 PE=1 SV=4
A0A167FWI8_9ASCO67.31%1563e-50Translation elongation factor 1 subunit beta OS=Sugiyamaella lignohabitans GN=EFB1 PE=3 SV=1

Mitochondrial localization by mitoprotII

Probability of mitochondrial location: 0.1128

Protein family membership

None predicted.

Domains and repeats

  1. Domain
1 50 100 150 221

Detailed signature matches

  1. Domain IPR010987
    Glutathione S-transferase, C-terminal-like
    1. SSF47616 (GST C-ter...)
  2. Domain IPR018940
    Elongation factor 1 beta central acidic region, eukaryote
    1. SM01182 (EF-1_beta_...)
    2. PF10587 (EF-1_beta_...)
  3. Domain IPR014717
    Translation elongation factor EF1B/ribosomal protein S6
    1. G3DSA:3.30.70.60
  4. Domain IPR014038
    Translation elongation factor EF1B, beta/delta subunit, guanine nucleotide exchange domain
    1. cd00292 (EF1B)
    2. SSF54984 (eEF-1beta...)
    3. PF00736 (EF1_GNE)
    4. SM00888 (EF1_GNE_2)
  5. SITE IPR001326
    Translation elongation factor EF1B, beta/delta chains, conserved site
    1. PS00825 (EF1BD_2)
    2. PS00824 (EF1BD_1)
Unintegrated signatures no IPR
Unintegrated signatures
  1. G3DSA:1.20.10...
  2. cd10308 (GST_C_eEF1...)
  3. mobidb-lite (disord...)

Residue annotation

  1. putative protein i...
  2. putative protein i...
  3. EF1A interaction s...

Protein sequence

>MCA_02048_1
MGFSDLSSAAGLKSLNTFLADKSYIEGTSPSQADVAVYKAVGSAPDAESYPNAARWYKHIASYSEEFSSLPGDKDAKASQ
FGPSESAAAEEEDDEDVDLFGSDDEEDEEAERVKAERLAEYQKKKATSKPKPAAKSIVTLDVKPWDDETDMDELLANVKA
INMDGLVWGGHQFIPIGYGIKKLQINCVIEDEKVSVTAIEEAIADDEDHVQSTDVAAMQKL

GO term prediction

Biological Process

GO:0006414 translational elongation

Molecular Function

GO:0003746 translation elongation factor activity

Cellular Component

GO:0005853 eukaryotic translation elongation factor 1 complex