Protein

MCA_02002_2

Length
106 amino acids

Gene name: RPL30

Description: 60S ribosomal protein L30

Browser: contigB:15781-16169+

RNA-seq: read pairs 27708, FPKM 3199.6, percentile rank 98.6% (100% = highest expression)

Protein function

Annotation:RPL3060S ribosomal protein L30
KEGG:K02908RP-L30e large subunit ribosomal protein L30e
EGGNOG:0PPNRRPL3060s ribosomal protein l30
SGD closest match:S000002998RPL3060S ribosomal protein L30
CGD closest match:CAL0000189848RPL30Ribosomal 60S subunit protein L30

Protein alignments

%idAln lengthE-value
MIA_05591_193.33%1051e-67MIA_05591_1
A0A0F7RQM1_GEOCN84.91%1068e-64Similar to Saccharomyces cerevisiae YGL030W RPL30 Ribosomal 60S subunit protein L30 OS=Geotrichum candidum GN=BN980_GECA01s10537g PE=4 SV=1
A0A060TAA9_BLAAD85.85%1063e-63ARAD1C44352p OS=Blastobotrys adeninivorans GN=GNLVRS02_ARAD1C44352g PE=3 SV=1
UniRef50_A0A1E3QAP981.13%1063e-57Uncharacterized protein n=3 Tax=Dikarya TaxID=451864 RepID=A0A1E3QAP9_LIPST
A0A1E3PNY5_9ASCO79.81%1041e-6060S ribosomal protein L30 OS=Nadsonia fulvescens var. elongata DSM 6958 GN=NADFUDRAFT_49590 PE=4 SV=1
RL30_YARLI80.58%1034e-6060S ribosomal protein L30 OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=RPL30 PE=3 SV=1
A0A1D8PM75_CANAL78.30%1061e-59Ribosomal 60S subunit protein L30 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=RPL30 PE=4 SV=1
RL30_YEAST77.36%1062e-5660S ribosomal protein L30 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=RPL30 PE=1 SV=3
A0A1E4TB43_9ASCO69.90%1031e-50Uncharacterized protein OS=Tortispora caseinolytica NRRL Y-17796 GN=CANCADRAFT_132312 PE=3 SV=1

Mitochondrial localization by mitoprotII

Probability of mitochondrial location: 0.0509

Protein family membership

None predicted.

Domains and repeats

  1. Domain
1 10 20 30 40 50 60 70 80 90 100 106

Detailed signature matches

  1. Domain IPR029064
    50S ribosomal protein L30e-like
    1. SSF55315 (L30e-like)
    2. G3DSA:3.30.13...
  2. Domain IPR004038
    Ribosomal protein L7Ae/L30e/S12e/Gadd45
    1. PF01248 (Ribosomal_...)
  3. SITE IPR022991
    Ribosomal protein L30e, conserved site
    1. PS00993 (RIBOSOMAL_...)
    2. PS00709 (RIBOSOMAL_...)

Protein sequence

>MCA_02002_2
MAPKAKKDQENINSRLGLVIKSGKYTLGYKSTIKALRQGKAKLVIIAGNTPLLRKSELEYYALLSKTTVHHFQGGNNELG
TACGKLFRVGVLAVLDAGDSDILTTV

GO term prediction

Biological Process

None predicted.

Molecular Function

None predicted.

Cellular Component

None predicted.