Protein

MCA_01998_1

Length
129 amino acids

Gene name: VPS55

Description: Vacuolar protein sorting-associated protein 55

Browser: contigB:12007-12519+

RNA-seq: read pairs 1052, FPKM 100.0, percentile rank 78.6% (100% = highest expression)

Protein function

Annotation:VPS55Vacuolar protein sorting-associated protein 55
EGGNOG:0PQQAVPS55vacuolar protein sorting 55 superfamily
SGD closest match:S000003805VPS55Vacuolar protein sorting-associated protein 55
CGD closest match:CAL0000201394CAALFM_CR03130WAUncharacterized protein

Protein alignments

%idAln lengthE-value
MIA_05584_180.62%1292e-73MIA_05584_1
Q6C364_YARLI68.99%1296e-62YALI0F02277p OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=YALI0_F02277g PE=4 SV=1
UniRef50_Q6C36468.99%1291e-58YALI0F02277p n=2 Tax=Yarrowia lipolytica TaxID=4952 RepID=Q6C364_YARLI
A0A0J9X7Z0_GEOCN67.97%1287e-62Similar to Saccharomyces cerevisiae YJR044C VPS55 Late endosomal protein involved in late endosome to vacuole trafficking OS=Geotrichum candidum GN=BN980_GECA04s07303g PE=4 SV=1
A0A060T725_BLAAD67.44%1294e-61ARAD1B19602p OS=Blastobotrys adeninivorans GN=GNLVRS02_ARAD1B19602g PE=4 SV=1
A0A1E3PTD6_9ASCO64.34%1291e-57Vacuolar protein sorting 55 OS=Nadsonia fulvescens var. elongata DSM 6958 GN=NADFUDRAFT_81496 PE=4 SV=1
VPS55_YEAST51.18%1273e-34Vacuolar protein sorting-associated protein 55 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=VPS55 PE=1 SV=1
A0A1D8PSD3_CANAL45.26%1377e-31Uncharacterized protein OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=CAALFM_CR03130WA PE=4 SV=1

Mitochondrial localization by mitoprotII

Probability of mitochondrial location: 0.0758

Protein family membership

Domains and repeats

None predicted.

Detailed signature matches

  1. Family IPR007262
    Vacuolar protein sorting 55
    1. PF04133 (Vps55)
Unintegrated signatures no IPR
Unintegrated signatures
  1. CYTOPLASMIC_D... (C...)
  2. NON_CYTOPLASM... (N...)
  3. TMhelix
  4. TRANSMEMBRANE (Tran...)

Protein sequence

>MCA_01998_1
MNVSPLYKIIALSTVLAAGFILIILSCALYSNWIPLTVVALFLLAPIPNGICSKYQAQDDFMSDSSSTIVDFGRFSTGFL
VLSGIILPIILAHNAIIGIPAMIMSLVGGGLVYATIITFRSFFHEPEEF

GO term prediction

Biological Process

None predicted.

Molecular Function

None predicted.

Cellular Component

None predicted.