Protein
MCA_01977_1
Length
211 amino acids
Browser: contigA:6018025-6018751+
RNA-seq: read pairs 3478, FPKM 202.7, percentile rank 88.2% (100% = highest expression)
Protein function
| EGGNOG: | 0PQ8Q | Anticodon-binding domain | |
|---|---|---|---|
| SGD closest match: | S000001163 | LSM12 | Protein LSM12 |
| CGD closest match: | CAL0000175092 | orf19.3698 | Uncharacterized protein |
Protein alignments
| %id | Aln length | E-value | ||
|---|---|---|---|---|
| MIA_06363_1 | 57.48% | 214 | 3e-72 | MIA_06363_1 |
| A0A0J9XGL1_GEOCN | 45.95% | 222 | 6e-59 | Uncharacterized protein OS=Geotrichum candidum GN=BN980_GECA15s00978g PE=4 SV=1 |
| UniRef50_A0A0J9XGL1 | 45.95% | 222 | 1e-55 | Uncharacterized protein n=1 Tax=Geotrichum candidum TaxID=1173061 RepID=A0A0J9XGL1_GEOCN |
| A0A167DW21_9ASCO | 38.61% | 202 | 1e-38 | Lsm12p OS=Sugiyamaella lignohabitans GN=LSM12 PE=4 SV=1 |
| A0A060TB32_BLAAD | 39.32% | 206 | 2e-37 | ARAD1D24750p OS=Blastobotrys adeninivorans GN=GNLVRS02_ARAD1D24750g PE=4 SV=1 |
| A0A1E3PNB1_9ASCO | 35.00% | 200 | 1e-31 | Uncharacterized protein OS=Nadsonia fulvescens var. elongata DSM 6958 GN=NADFUDRAFT_40100 PE=4 SV=1 |
| Q6CCA6_YARLI | 28.51% | 221 | 5e-25 | YALI0C11055p OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=YALI0_C11055g PE=4 SV=1 |
| LSM12_YEAST | 28.57% | 210 | 6e-19 | Protein LSM12 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=LSM12 PE=1 SV=1 |
| Q59LZ7_CANAL | 35.06% | 77 | 1e-07 | Uncharacterized protein OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=orf19.3698 PE=4 SV=1 |
| A0A1E4TBM1_9ASCO | 27.27% | 77 | 4e-06 | Uncharacterized protein OS=Tortispora caseinolytica NRRL Y-17796 GN=CANCADRAFT_45530 PE=4 SV=1 |
Mitochondrial localization by mitoprotII
Probability of mitochondrial location: 0.0794
Protein family membership
- RNA-processing, Lsm12 (IPR016521)
Domains and repeats
-
Domain
1
20
40
60
80
100
120
140
160
180
200
211
Detailed signature matches
-
-
PIRSF007783 (YHR121w)
-
Protein sequence
>MCA_01977_1 MSEGTIDWALGLKVQITTLLDNTIIGTVYAFCQTTNTIALLEEPDSSEGNITNSEKAKSSPNYRIIKTSFVRDIIVLGKP KKIASPSSASIVAGTPYRDIFSKASPPISKVNVSTIPAKAYNAVQAELKNRSKIGVGVSKEAQEIFDQLSKVVPCVWKGK SIIAMDEVQINPPYTPESCISEDRAQAQLYIQKLVEGIQKKLFNGNIIKGG
GO term prediction
Biological Process
None predicted.
Molecular Function
None predicted.
Cellular Component
None predicted.