Protein

MCA_01973_1

Length
143 amino acids

Gene name: DIB1

Description: Spliceosomal protein DIB1

Browser: contigA:6008749-6009250+

RNA-seq: read pairs 398, FPKM 34.2, percentile rank 56.3% (100% = highest expression)

Protein function

Annotation:DIB1Spliceosomal protein DIB1
KEGG:K12859TXNL4A U5 snRNP protein, DIM1 family
EGGNOG:0PMYKDIB1mitosis protein dim1
SGD closest match:S000006286DIB1Spliceosomal protein DIB1
CGD closest match:CAL0000196950orf19.1975U4/U6-U5 snRNP complex subunit

Protein alignments

%idAln lengthE-value
MIA_06330_193.71%1435e-100MIA_06330_1
A0A0J9X4H2_GEOCN89.51%1433e-97Similar to Saccharomyces cerevisiae YPR082C DIB1 17-kDa component of the U4/U6aU5 tri-snRNP OS=Geotrichum candidum GN=BN980_GECA02s04855g PE=4 SV=1
A0A161HHM1_9ASCO83.92%1432e-91Dib1p OS=Sugiyamaella lignohabitans GN=DIB1 PE=4 SV=1
A0A060T4T6_BLAAD82.52%1432e-91ARAD1C43956p OS=Blastobotrys adeninivorans GN=GNLVRS02_ARAD1C43956g PE=4 SV=1
A0A1E3PPU8_9ASCO79.72%1439e-894A/4B type thioredoxin-like protein OS=Nadsonia fulvescens var. elongata DSM 6958 GN=NADFUDRAFT_49382 PE=4 SV=1
UniRef50_A0A135LDC979.02%1433e-84mRNA splicing factor, thioredoxin-like U5 snRNP n=5 Tax=leotiomyceta TaxID=716546 RepID=A0A135LDC9_PENPA
Q6C5W4_YARLI78.32%1434e-87YALI0E14619p OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=YALI0_E14619g PE=4 SV=1
A0A1E4TC95_9ASCO80.00%1355e-80Uncharacterized protein OS=Tortispora caseinolytica NRRL Y-17796 GN=CANCADRAFT_32627 PE=4 SV=1
Q5A1M0_CANAL71.23%1465e-77U4/U6-U5 snRNP complex subunit OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=orf19.1975 PE=4 SV=1
DIB1_YEAST70.92%1411e-75Spliceosomal protein DIB1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=DIB1 PE=1 SV=1

Mitochondrial localization by mitoprotII

Probability of mitochondrial location: 0.0180

Protein family membership

Domains and repeats

  1. Domain
1 20 40 60 80 100 120 143

Detailed signature matches

  1. Family IPR004123
    Dim1 family
    1. SM01410 (DIM1_2)
    2. PF02966 (DIM1)
    3. PIRSF017199 (Dim1)
  2. Domain IPR012336
    Thioredoxin-like fold
    1. SSF52833 (Thioredox...)
Unintegrated signatures no IPR
Unintegrated signatures
  1. G3DSA:3.40.30.10
  2. cd02954 (DIM1)

Residue annotation

  1. first critical sit...
  2. second critical si...

Protein sequence

>MCA_01973_1
MGSVFLPHLHTGWHVDQAILSEEDRLVVIRFGRDHDPECMIMDEVLYSIADKVKNFAVIYLCDIEEVTAFNQIYELYDPM
AIMFFYRNKHMLCDFGTGNNNKLNWVLDDKQELIDIIEVIYRGARKGKGLVMSPKDYSTKHKY

GO term prediction

Biological Process

GO:0000398 mRNA splicing, via spliceosome

Molecular Function

None predicted.

Cellular Component

GO:0005681 spliceosomal complex