Protein
MCA_01932_1
Length
911 amino acids
Gene name: VPS36
Description: Vacuolar protein-sorting-associated protein 36
Browser: contigA:5906667-5909403-
RNA-seq: read pairs 1765, FPKM 23.9, percentile rank 46.3% (100% = highest expression)
Protein function
| Annotation: | VPS36 | Vacuolar protein-sorting-associated protein 36 | |
|---|---|---|---|
| KEGG: | K12190 | VPS36 | ESCRT-II complex subunit VPS36 |
| EGGNOG: | 0PJAT | PGUG_02456 | vacuolar protein sorting protein |
| SGD closest match: | S000004409 | VPS36 | Vacuolar protein-sorting-associated protein 36 |
| CGD closest match: | CAL0000194345 | VPS36 | ESCRT-II subunit protein |
Protein alignments
| %id | Aln length | E-value | ||
|---|---|---|---|---|
| MIA_02241_1 | 47.27% | 715 | 0.0 | MIA_02241_1 |
| A0A0J9X2S6_GEOCN | 36.23% | 690 | 3e-106 | Similar to Saccharomyces cerevisiae YLR417W VPS36 Component of the ESCRT-II complex OS=Geotrichum candidum GN=BN980_GECA01s05576g PE=4 SV=1 |
| UniRef50_A0A0J9X2S6 | 36.23% | 690 | 7e-103 | Similar to Saccharomyces cerevisiae YLR417W VPS36 Component of the ESCRT-II complex n=1 Tax=Geotrichum candidum TaxID=1173061 RepID=A0A0J9X2S6_GEOCN |
| A0A167FS98_9ASCO | 39.51% | 410 | 2e-77 | ESCRT-II subunit protein VPS36 OS=Sugiyamaella lignohabitans GN=VPS36 PE=4 SV=1 |
| A0A060T3W0_BLAAD | 37.50% | 408 | 1e-70 | ARAD1C39952p OS=Blastobotrys adeninivorans GN=GNLVRS02_ARAD1C39952g PE=4 SV=1 |
| A0A1E3PGT4_9ASCO | 35.22% | 406 | 5e-61 | Vps36-domain-containing protein (Fragment) OS=Nadsonia fulvescens var. elongata DSM 6958 GN=NADFUDRAFT_14270 PE=4 SV=1 |
| Q6CAN8_YARLI | 28.61% | 402 | 4e-40 | YALI0D01177p OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=YALI0_D01177g PE=4 SV=1 |
| A0A1E4TAC2_9ASCO | 27.54% | 305 | 9e-19 | Uncharacterized protein OS=Tortispora caseinolytica NRRL Y-17796 GN=CANCADRAFT_127269 PE=4 SV=1 |
| A0A1D8PH22_CANAL | 22.14% | 411 | 1e-15 | ESCRT-II subunit protein OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=VPS36 PE=4 SV=1 |
| VPS36_YEAST | 38.26% | 115 | 2e-14 | Vacuolar protein-sorting-associated protein 36 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=VPS36 PE=1 SV=1 |
Mitochondrial localization by mitoprotII
Probability of mitochondrial location: 0.0522
Protein family membership
- EAP30 (IPR007286)
Domains and repeats
-
Domain
-
Domain
-
Domain
1
100
200
300
400
500
600
700
800
911
Detailed signature matches
no IPR
Unintegrated signatures
-
-
-
mobidb-lite (disord...)
Protein sequence
>MCA_01932_1 MGWWSRLELTAGLRPQLKSSEKEILVQSHVGLYEGKSKALLFQDGRVYLTSRRLCYVDSAYPQERSLELSLSDIESIDYY GGFMRSSAKIIINVVEKLSDYDLAFAQVTGSNDTINGAKAKTSTDKTRRFPTPSLLSSSSSSKNNTSTSSTPASVHGNTN DKLNQDPKTLYQQIQKIQTIQQAQRRRTKIPLHEVTWICPICYFSNHLPNDFEWPELDFPKSLEDLADPLENTNMPPCST CGIRGTRKAVFQAIEQVLGVTKANNNSIAIPDRIDSDLTVEEPPYKVDSNNIMDQVSNNTFLIDVLKPTVNNAKSADTVS VSSVDKPIASDPDGTDPDGFPCPRCTFINHPSLNFCEICGARLVSAHLPPQLNRVIVQDIDTISVNSPASSIGGKKKIIE DIKNNINGGYSDSASSSMSVLQYDEDGYIVSLLGSQTPADSFTNSNNTENSNNSLINKNSASRVFKLSFRSGGDKQFYEA LKQAINKKEWLSGKTNEFSSSTDLSLPNKTFSDGRHQTSSGSTVGSSSATNPVNRLAVGIHGLQLSDESKREKNRQVLGA GLEDLNELMNCAKDLVKLAEDYARFLEQNKSLLNSDDSNGDTSELKAAQEARRSLAYSTQALGLSSAVVTKELMGSDDIE EYYAELARQIAEFLTDTKTFYGSTHDYNNNDGFRPTQRNATNSTIPTSVLDREGGIITLFDLFAVYNRARGVSLISPKDL YNACNKLQELKLPITLRRFKSGLNVVQESYKTPEVIIRNLVQWMQQRGKDYVSQRRREIAEARALKAIFAESSEEATVTS SMKQEEQQEDGEPTFYEFEGTGVTAMEVSTKFKWSVMIATEELEMAEERGVLCRDEQLSGTVFYENYFLKFPVWNWKAEL FGETCTTNNDSYSSSFDNQDKKKRDKSKKKK
GO term prediction
Biological Process
None predicted.
Molecular Function
GO:0032266 phosphatidylinositol-3-phosphate binding
GO:0043130 ubiquitin binding
Cellular Component
None predicted.