Protein

MCA_01905_1

Length
210 amino acids

Browser: contigA:5835639-5836563-

RNA-seq: read pairs 5563, FPKM 325.8, percentile rank 92.3% (100% = highest expression)

Protein function

KEGG:K07904RAB11A Ras-related protein Rab-11A
EGGNOG:0PJC3(GTP)-binding protein
SGD closest match:S000003178YPT32GTP-binding protein YPT32/YPT11
CGD closest match:CAL0000190363YPT31Rab family GTPase

Protein alignments

%idAln lengthE-value
A0A0J9X745_GEOCN83.89%2116e-134Similar to Saccharomyces cerevisiae YER031C YPT31 Rab family GTPase OS=Geotrichum candidum GN=BN980_GECA04s03414g PE=4 SV=1
MIA_02264_186.26%2114e-133MIA_02264_1
A0A060T9P5_BLAAD81.43%2104e-130ARAD1B00814p OS=Blastobotrys adeninivorans GN=GNLVRS02_ARAD1B00814g PE=4 SV=1
UniRef50_A0A0L0H6J772.86%2103e-110Small GTP-binding protein domain n=87 Tax=Opisthokonta TaxID=33154 RepID=A0A0L0H6J7_SPIPN
Q6C932_YARLI71.23%2122e-112YALI0D14630p OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=YALI0_D14630g PE=4 SV=2
A0A1E3PPY2_9ASCO68.57%2106e-109Ras-domain-containing protein OS=Nadsonia fulvescens var. elongata DSM 6958 GN=NADFUDRAFT_45491 PE=4 SV=1
A0A1E4TFZ0_9ASCO68.90%2094e-98Uncharacterized protein OS=Tortispora caseinolytica NRRL Y-17796 GN=CANCADRAFT_44334 PE=4 SV=1
A0A1D8PTI2_CANAL62.93%2051e-95Rab family GTPase OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=YPT31 PE=1 SV=1
YPT32_YEAST60.28%2146e-91GTP-binding protein YPT32/YPT11 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YPT32 PE=1 SV=3
A0A167FV34_9ASCO76.00%1251e-68Rab family GTPase YPT32 OS=Sugiyamaella lignohabitans GN=YPT32 PE=4 SV=1

Mitochondrial localization by mitoprotII

Probability of mitochondrial location: 0.0416

Protein family membership

Domains and repeats

  1. Domain
1 20 40 60 80 100 120 140 160 180 200 210

Detailed signature matches

  1. Family IPR001806
    Small GTPase superfamily
    1. PF00071 (Ras)
  2. Domain IPR027417
    P-loop containing nucleoside triphosphate hydrolase
    1. SSF52540 (P-loop co...)
  3. Domain IPR005225
    Small GTP-binding protein domain
    1. TIGR00231
Unintegrated signatures no IPR
Unintegrated signatures
  1. G3DSA:3.30.70...
  2. G3DSA:3.40.50...
  3. PR00449 (RASTRNSFRMNG)
  4. PS51419 (RAB)
  5. SM00173 (ras_sub_4)
  6. SM00174 (rho_sub_3)
  7. SM00175 (rab_sub_5)
  8. SM00176 (ran_sub_2)
  9. cd01868 (Rab11_like)
  10. mobidb-lite (disord...)

Residue annotation

  1. Rab subfamily moti...
  2. G1 box cd01868
  3. GTP/Mg2+ binding s...
  4. Rab subfamily moti...
  5. Switch I region cd...
  6. putative GEF inter...
  7. G2 box cd01868
  8. Rab family motif 1...
  9. putative GDI inter...
  10. putative effector ...
  11. Rab family motif 2...
  12. G3 box cd01868
  13. Switch II region c...
  14. Rab family motif 3...
  15. Rab family motif 4...
  16. Rab family motif 5...
  17. Rab subfamily moti...
  18. G4 box cd01868
  19. G5 box cd01868
  20. Rab subfamily moti...

Protein sequence

>MCA_01905_1
MSDEYDFLFKVVLIGDSGVGKSNILGRFTRNEFNIESKSTIGVEFATRTVTVDGKTIKAQIWDTAGQERYRAITSAYYRG
AVGALLMYDITKSETYEHVSRWLEELKDHADPQIVVMLVGNKCDLKHLRAIPTEEAKNFATEKSLLFIETSALDATNVEV
AFQNILTEIYRLYADQSLQTDFVQSRPTPGQTIKFSPSDEENTKKSSQCC

GO term prediction

Biological Process

None predicted.

Molecular Function

GO:0003924 GTPase activity
GO:0005525 GTP binding

Cellular Component

None predicted.