Protein
MCA_01896_1
Length
621 amino acids
Browser: contigA:5809552-5811418-
RNA-seq: read pairs 1319, FPKM 26.2, percentile rank 48.9% (100% = highest expression)
Protein function
| EGGNOG: | 0PM65 | FG01139.1 | Helix-loop-helix DNA-binding domain |
|---|---|---|---|
| SGD closest match: | S000000199 | RTG3 | Retrograde regulation protein 3 |
| CGD closest match: | CAL0000178438 | TRY6 | Transcriptional regulator of yeast form adherence 6 |
Protein alignments
| %id | Aln length | E-value | ||
|---|---|---|---|---|
| MIA_02645_1 | 52.67% | 243 | 8e-60 | MIA_02645_1 |
| Q6CD58_YARLI | 52.76% | 127 | 3e-30 | YALI0C03564p OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=YALI0_C03564g PE=4 SV=1 |
| UniRef50_Q6CD58 | 52.76% | 127 | 8e-27 | YALI0C03564p n=2 Tax=Yarrowia lipolytica TaxID=4952 RepID=Q6CD58_YARLI |
| A0A060T113_BLAAD | 60.00% | 70 | 3e-23 | ARAD1C12980p OS=Blastobotrys adeninivorans GN=GNLVRS02_ARAD1C12980g PE=4 SV=1 |
| A0A167FDI5_9ASCO | 51.85% | 81 | 2e-22 | Max-like protein X OS=Sugiyamaella lignohabitans GN=AWJ20_2786 PE=4 SV=1 |
| A0A0J9X383_GEOCN | 58.33% | 84 | 5e-21 | Uncharacterized protein OS=Geotrichum candidum GN=BN980_GECA01s09800g PE=4 SV=1 |
| A0A1E4TAI4_9ASCO | 53.97% | 63 | 4e-17 | Uncharacterized protein OS=Tortispora caseinolytica NRRL Y-17796 GN=CANCADRAFT_128048 PE=4 SV=1 |
| TRY6_CANAL | 39.39% | 99 | 2e-11 | Transcriptional regulator of yeast form adherence 6 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=TRY6 PE=2 SV=1 |
| RTG3_YEAST | 37.66% | 77 | 4e-06 | Retrograde regulation protein 3 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=RTG3 PE=1 SV=2 |
Mitochondrial localization by mitoprotII
Probability of mitochondrial location: 0.1611
Protein family membership
None predicted.
Domains and repeats
-
Domain
1
100
200
300
400
500
621
Detailed signature matches
no IPR
Unintegrated signatures
-
-
mobidb-lite (disord...)
Residue annotation
-
DNA binding region...
-
E-box/N-box specif...
-
dimerization inter...
Protein sequence
>MCA_01896_1 MKKQLLPIKPKTAMPSNQKIQKNSETLDSLPPPAKPKGRSYSTSAATTIRSQRSRQTKSEKPSMPTPSPKSTVFHSSPSI LASGFILDPLVLPPPALDSHTITLSPQTIKPNYSLSNNENNNSNSISAPTSSCIQPVKLPPPPNRKRTIIHMTPSSIESA NNSPANSPKFTNYEPGSSNNGSTKRRKRNASLPDPSSVHLISPVLSPSITNPNAKTRAGSLGSFKDPKAAATTSASSLKA ASALSSATNSAPTTNDNSASTMTPPTPPNISDSELKRNARRTAHSEIERRRRSKMNQEFESLKILVPACQQTISSNGNTG LHKLVILQETVEYVRYLKKCLETLETQNQEMQAHMINLEQRLNNCYQNSMSPVTTTAPPLQQNSGSAFSSVSHTPIMKSQ VSSPQQYTPSSSGMKLEDVVAAAVASQPAYVPNSSSKNEMKETSNYFIHQQQIHEKDVQERPSINNESNDDDHAYKVTSE PSNNASLPAFMAGDSSSLSSSTKRSLDSDLPSVSTMLSASSSTSSFSEDSSNDKINNNNNNNNMLQPNSPKPSNSKDTTP RLDEETEIRNSQLASPVSISHTPNYSPSSGERISPSNSSDKSSSSSTIKPSPRIRVSDLIC
GO term prediction
Biological Process
None predicted.
Molecular Function
GO:0046983 protein dimerization activity
Cellular Component
None predicted.