Protein

MCA_01894_1

Length
608 amino acids

Description: Protein with F-box domain and leucine-rich repeat domain

Browser: contigA:5803425-5805252-

RNA-seq: read pairs 36, FPKM 0.7, percentile rank 8.1% (100% = highest expression)

Protein function

Annotation:Protein with F-box domain and leucine-rich repeat domain

Protein alignments

%idAln lengthE-value
MIA_04663_131.71%1232e-10MIA_04663_1

Mitochondrial localization by mitoprotII

Probability of mitochondrial location: 0.2281

Protein family membership

None predicted.

Domains and repeats

  1. Domain
  2. Domain
1 100 200 300 400 500 608

Detailed signature matches

  1. Domain IPR001810
    F-box domain
    1. SSF81383 (F-box domain)
    2. PS50181 (FBOX)
    3. SM00256 (fbox_2)
    4. PF12937 (F-box-like)
  2. Domain IPR032675
    Leucine-rich repeat domain, L domain-like
    1. G3DSA:3.80.10.10
Unintegrated signatures no IPR
Unintegrated signatures
  1. G3DSA:1.20.12...

Protein sequence

>MCA_01894_1
MAIANFCLETLPRELLLCVFQYISVPDLLNISQTCNSLRTVTHTLVYEHCRAYNPLFSTNKRISQARSEIPFPVLFTPDA
YSWFPNENVKTVQLSSFYIDLCLLRLPLSNYPSIKHIDIKHQSHFQDKSYTVISNSLTTCDDLLQQSRVFPKTDDLILLI
RNKHNMISIPHIDSKMILNCQSVDTRNMVTSLKLCIPDSETVEHSVRMDLGKTFPNLKSLSLSILSWSSDYQLQDVVTKG
CKRLCQLEIIVYGVSDCISMLRNFTNPRPSTNFRLIVTGSRNFFAINKMINLWSVTQLYIESHVVFSPDPQTVCNLKSLQ
VVISPQTVRHYSCKPTFENLVSLAINCPQGVSKYDSSPIFCYSMPKLKNLRVSLVALQRPMRQSTLQLQVFRVIMNRYKF
GTFNPLRISHLNQILSDLSDYGILPKKMTYNLALAEVNNFLRGRDSFSEIRSSYFMADSIRHYLIFYFIQIFAAGNQFER
RDILEISDSCFLNFHFDSINRNFPNLENLYLSQIRSIEEFPGLHCLVLNHKNLSRVEIDNLSLKPERLNCSDKMYHIFYN
CIKSGGTQESEDACIVFKNSSAEYETLDPYYIDVDKFRNKLFSSKKNK

GO term prediction

Biological Process

None predicted.

Molecular Function

GO:0005515 protein binding

Cellular Component

None predicted.