Protein
MCA_01867_1
Length
332 amino acids
Gene name: FIP1
Description: Pre-mRNA polyadenylation factor FIP1
Browser: contigA:5725227-5726295+
RNA-seq: read pairs 2775, FPKM 103.0, percentile rank 79.2% (100% = highest expression)
Protein function
| Annotation: | FIP1 | Pre-mRNA polyadenylation factor FIP1 | |
|---|---|---|---|
| KEGG: | K14405 | FIP1L1 | pre-mRNA 3'-end-processing factor FIP1 |
| EGGNOG: | 0PQ13 | FIP1 | Pre-mRNA polyadenylation factor fip-1 |
| SGD closest match: | S000003853 | FIP1 | Pre-mRNA polyadenylation factor FIP1 |
| CGD closest match: | CAL0000182961 | FIP1 | Pre-mRNA polyadenylation factor FIP1 |
Protein alignments
| %id | Aln length | E-value | ||
|---|---|---|---|---|
| MIA_02417_1 | 42.90% | 338 | 8e-48 | MIA_02417_1 |
| A0A0J9XD60_GEOCN | 49.15% | 118 | 1e-30 | Uncharacterized protein OS=Geotrichum candidum GN=BN980_GECA11s01539g PE=4 SV=1 |
| UniRef50_A0A0J9XD60 | 49.15% | 118 | 2e-27 | Uncharacterized protein n=1 Tax=Geotrichum candidum TaxID=1173061 RepID=A0A0J9XD60_GEOCN |
| A0A167DLL1_9ASCO | 55.29% | 85 | 6e-27 | Fip1p OS=Sugiyamaella lignohabitans GN=FIP1 PE=4 SV=1 |
| A0A060TB64_BLAAD | 59.74% | 77 | 2e-26 | ARAD1D32494p OS=Blastobotrys adeninivorans GN=GNLVRS02_ARAD1D32494g PE=4 SV=1 |
| A0A1E3PE85_9ASCO | 36.79% | 212 | 8e-26 | Fip1-domain-containing protein OS=Nadsonia fulvescens var. elongata DSM 6958 GN=NADFUDRAFT_67636 PE=4 SV=1 |
| FIP1_YARLI | 53.42% | 73 | 2e-22 | Pre-mRNA polyadenylation factor FIP1 OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=FIP1 PE=3 SV=1 |
| A0A1E4TB57_9ASCO | 49.38% | 81 | 4e-22 | Uncharacterized protein OS=Tortispora caseinolytica NRRL Y-17796 GN=CANCADRAFT_45469 PE=4 SV=1 |
| FIP1_CANAL | 50.00% | 76 | 1e-18 | Pre-mRNA polyadenylation factor FIP1 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=FIP1 PE=3 SV=1 |
| FIP1_YEAST | 39.02% | 82 | 2e-13 | Pre-mRNA polyadenylation factor FIP1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=FIP1 PE=1 SV=1 |
Mitochondrial localization by mitoprotII
Probability of mitochondrial location: 0.0227
Protein family membership
None predicted.
Domains and repeats
-
Domain
1
50
100
150
200
250
300
332
Detailed signature matches
no IPR
Unintegrated signatures
-
mobidb-lite (disord...)
Protein sequence
>MCA_01867_1 MAPVDDDEDAYLYGESQAKRIRTDSDKDISSASHPVISESVNSPNSLGLDQQQGNENNNESEQQSSKPPSITEYEDGSEE SDSDIEFIIYPEAGQRVEPPQKFGPYSRVTNVNSSVANSASESAGSEITSSSDPSQTVQRKGINLDAIGEWEGQPITEVS FDNFEDKPWRKPGADITDYFNYGFDELTWAAYCSRQDNLSSFNSQKVMKILGQNSQFSMQMMGSNMMPGGFNNVGFPPAP TAFPTGGFDMMGMDMFPGMPGFPMGNMGAPNVNNPGMNPSVNNDDGAYGGNVQGVAGLVANPHPQGMAFRKNDDQNNFNN FAGNVWNNPNNR
GO term prediction
Biological Process
None predicted.
Molecular Function
None predicted.
Cellular Component
None predicted.