Protein

MCA_01786_1

Length
738 amino acids

Gene name: CLN3

Description: G1 cyclin involved in cell cycle progression

Browser: contigA:5454627-5456844+

RNA-seq: read pairs 724, FPKM 12.1, percentile rank 29.4% (100% = highest expression)

Protein function

Annotation:CLN3G1 cyclin involved in cell cycle progression
EGGNOG:0PI0XFG00941.1G1 S-specific cyclin
SGD closest match:S000000038CLN3G1/S-specific cyclin CLN3
CGD closest match:CAL0000199358CCN1G1/S-specific cyclin CCN1

Protein alignments

%idAln lengthE-value
MIA_02299_151.41%2846e-89MIA_02299_1
A0A0J9XCF3_GEOCN47.75%2893e-83Similar to Saccharomyces cerevisiae YAL040C CLN3 G1 cyclin involved in cell cycle progression OS=Geotrichum candidum GN=BN980_GECA08s00472g PE=3 SV=1
UniRef50_A0A0J9XCF347.75%2896e-80Similar to Saccharomyces cerevisiae YAL040C CLN3 G1 cyclin involved in cell cycle progression n=1 Tax=Geotrichum candidum TaxID=1173061 RepID=A0A0J9XCF3_GEOCN
A0A161HHL8_9ASCO47.54%2841e-78Cyclin CLN3 OS=Sugiyamaella lignohabitans GN=CLN3 PE=3 SV=1
Q6CC01_YARLI43.25%2891e-74YALI0C13926p OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=YALI0_C13926g PE=3 SV=1
A0A060T1S9_BLAAD44.28%2716e-68ARAD1A02530p OS=Blastobotrys adeninivorans GN=GNLVRS02_ARAD1A02530g PE=3 SV=1
A0A1E4TFS9_9ASCO40.43%2773e-63Uncharacterized protein (Fragment) OS=Tortispora caseinolytica NRRL Y-17796 GN=CANCADRAFT_17434 PE=3 SV=1
A0A1E3PNC8_9ASCO46.67%2107e-59Uncharacterized protein OS=Nadsonia fulvescens var. elongata DSM 6958 GN=NADFUDRAFT_81576 PE=3 SV=1
CG11_CANAL50.23%2133e-57G1/S-specific cyclin CCN1 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=CCN1 PE=1 SV=2
CG13_YEAST35.44%1585e-25G1/S-specific cyclin CLN3 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=CLN3 PE=1 SV=2

Mitochondrial localization by mitoprotII

Probability of mitochondrial location: 0.1125

Protein family membership

None predicted.

Domains and repeats

  1. Domain
  2. Domain
1 100 200 300 400 500 600 738

Detailed signature matches

  1. Domain IPR013763
    Cyclin-like
    1. G3DSA:1.10.47...
    2. SSF47954 (Cyclin-like)
    3. SM00385 (cyclin_7)
    4. cd00043 (CYCLIN)
  2. Domain IPR006671
    Cyclin, N-terminal
    1. PS00292 (CYCLINS)
    2. PF00134 (Cyclin_N)
  3. Domain IPR004367
    Cyclin, C-terminal domain
    1. PF02984 (Cyclin_C)
Unintegrated signatures no IPR
Unintegrated signatures
  1. Coil
  2. mobidb-lite (disord...)

Residue annotation

  1. binding site 1 cd0...
  2. binding site 2 cd0...
  3. binding site 1 cd0...
  4. binding site 2 cd0...

Protein sequence

>MCA_01786_1
MTLYRSTSYQHQSSRQLQQHQPTTTSSSIYHHYNNNTTINNSLLSSYSSNQNPLYELPQVSYPVKHIPFTFSIPTQISNH
HNHHQQHSINTNISTFAWPKPCNVCNSDSSSSLSPTTRREIKESRVVELEYRNNIISHMLSMEKKTVSDPSMIDTQPEIK
WHMRPYLLDFLIKTHLNLGLTNETLFLAVNIIDRYSSQRIVFKRHYKLLGCTALWIASKYNDKKIKVPTLNELKLMCANT
YDSHMFTQMELHILTTLEWTIGHPTVDLFVDLCSSDGTSSSNESFPHTVSCHQTKNLVLYLCELSLYHKEFLAFTPSVLA
SAAFKLASLMVSNYTTYYYYPENYKRNNSNTEPLYLIPTNKMEHSCLEYLIYFSPSPTTCLETKYSTQKTCRAFSIVKMF
FQNCLRIKKLIFKPAYLSSSSSSPLANTDNIDNNNIINDSSSSSSSSNSSDSTTPKTSPKQIQHYSKTPSRSSSILSSSR
SPSTSPNSTITATNDYETPRKKRKISSSTEKSLYYYLSSDLTSSSSSTATTHGMVTPSYNKPNSITPVTTPMHSHIFSTA
TTTTSAAKAHPHNHHNHHNNNTQYYHLPKPSEVLSTIKPCSNNNKISSSSNLCRRQTSISTIITTKPTSSSSLGYMTPPF
TPDEEEDENKEEENNDREEEEKEEKNINQNDLLVDKKSSIITTKIVNTTNNSNNKSNLILIKDHTKYPTLNNYHYHHQQQ
QQRPAVRTISLDVENNYK

GO term prediction

Biological Process

None predicted.

Molecular Function

None predicted.

Cellular Component

GO:0005634 nucleus