Protein
MCA_01765_1
Length
819 amino acids
Gene name: CDC48
Description: Cell division control protein 48
Browser: contigA:5404169-5407166-
RNA-seq: read pairs 27182, FPKM 409.6, percentile rank 93.6% (100% = highest expression)
Protein function
| Annotation: | CDC48 | Cell division control protein 48 | |
|---|---|---|---|
| KEGG: | K13525 | VCP | transitional endoplasmic reticulum ATPase |
| EGGNOG: | 0PGP0 | CDC48 | Cell division control protein |
| SGD closest match: | S000002284 | CDC48 | Cell division control protein 48 |
| CGD closest match: | CAL0000177910 | CDC48 | AAA family ATPase |
Protein alignments
| %id | Aln length | E-value | ||
|---|---|---|---|---|
| MIA_04589_1 | 94.14% | 819 | 0.0 | MIA_04589_1 |
| A0A0J9XGM2_GEOCN | 90.75% | 778 | 0.0 | Similar to Saccharomyces cerevisiae YDL126C CDC48 ATPase involved in ubiquitin-mediated protein degradation OS=Geotrichum candidum GN=BN980_GECA16s01616g PE=3 SV=1 |
| A0A060SYS4_BLAAD | 87.09% | 821 | 0.0 | ARAD1A19316p OS=Blastobotrys adeninivorans GN=GNLVRS02_ARAD1A19316g PE=4 SV=1 |
| Q6C1Z3_YARLI | 90.21% | 776 | 0.0 | YALI0F12155p OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=YALI0_F12155g PE=3 SV=1 |
| A0A1E3PEM1_9ASCO | 85.14% | 821 | 0.0 | AAA ATPase OS=Nadsonia fulvescens var. elongata DSM 6958 GN=NADFUDRAFT_84356 PE=3 SV=1 |
| A0A1E4TBI5_9ASCO | 83.54% | 820 | 0.0 | Uncharacterized protein OS=Tortispora caseinolytica NRRL Y-17796 GN=CANCADRAFT_133764 PE=4 SV=1 |
| CDC48_YEAST | 81.47% | 831 | 0.0 | Cell division control protein 48 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=CDC48 PE=1 SV=3 |
| UniRef50_P25694 | 81.47% | 831 | 0.0 | Cell division control protein 48 n=710 Tax=Eukaryota TaxID=2759 RepID=CDC48_YEAST |
| Q59WG3_CANAL | 81.88% | 828 | 0.0 | AAA family ATPase OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=CDC48 PE=3 SV=1 |
| A0A167D3N9_9ASCO | 91.92% | 569 | 0.0 | AAA family ATPase CDC48 OS=Sugiyamaella lignohabitans GN=CDC48 PE=3 SV=1 |
Mitochondrial localization by mitoprotII
Probability of mitochondrial location: 0.0099
Protein family membership
- AAA ATPase, CDC48 family (IPR005938)
Domains and repeats
-
Domain
-
Domain
1
100
200
300
400
500
600
700
819
Detailed signature matches
no IPR
Unintegrated signatures
-
-
-
-
cd00009 (AAA)
-
mobidb-lite (disord...)
Residue annotation
-
Walker A motif cd0...
-
ATP binding site c...
-
Walker B motif cd0...
-
arginine finger cd...
-
Walker A motif cd0...
-
ATP binding site c...
-
Walker B motif cd0...
-
arginine finger cd...
Protein sequence
>MCA_01765_1 MPEDKKPLHHNLADASGSEANKEDLTATAILRRKKKDNALIVDDATNDDNSVIALSPNTMDKLELFRGDACIVKGKKRKD TVLVIVADEELEDGVCRINRVVRNNLRVRLGDVITIHPCPDIKYAKRISVLPIADTIEGLTGDIFEVFLKPYFVEAYRPV RKGDLFTVRGGMRQVEFKVVEVDPAEYGIVSQDTVIHTEGDPINREDEEGNLNEVGYDDIGGVRKQMAQIRELVELPLRH PQLFKSIGIKPPKGILMYGPPGTGKTLMARAVANETGAFFFLINGPEIMSKMAGESESNLRKAFEEAEKNAPSIIFIDEI DSIAPKRDKTNGEVERRVVSQLLTLMDGMKARSNIVVIAATNRPNSIDPALRRFGRFDREVDVGIPDPTGRLEILRIHTK NMKLADDVDLEAIASETHGYVGSDLASLCSEAAMQQIREKMDLIDLEEETIDAEVLDSLGVTMDNFRFALGISNPSALRE TVVQSVNVTWDDIGGLDKIKQELKETVEYPVLHPEMYTKFGLSPSKGVLFYGPPGTGKTLLAKAVATEVSANFISVKGPE LLSMWFGESESNIRDIFDKARAAAPCVVFLDELDSIAKARGGSVGDAGGATDRVVNQLLTEMDGMNAKKNVFVIGATNRP DQIDPALLRPGRLDQLIYVPLPDQAGRLSILKAQLRKTPLEPGLSLEEIAKSTSGFSGADLSYIVQRSAKFAIKESIEAS IRANENAEANGEEDVEMEDPVPYITREHFEEAMKTAARSVSDAELRRYESYAAQIQASRGTLNFRFTGDSAAPGAGSGNN ASGNEPALGGEGEDDDLYN
GO term prediction
Biological Process
None predicted.
Molecular Function
GO:0005524 ATP binding
GO:0016787 hydrolase activity
Cellular Component
None predicted.