Protein
MCA_01764_1
Length
632 amino acids
Gene name: PRP9
Description: Pre-mRNA-splicing factor PRP9
Browser: contigA:5402149-5404048+
RNA-seq: read pairs 904, FPKM 17.6, percentile rank 38.0% (100% = highest expression)
Protein function
| Annotation: | PRP9 | Pre-mRNA-splicing factor PRP9 | |
|---|---|---|---|
| KEGG: | K12827 | SF3A3 | splicing factor 3A subunit 3 |
| EGGNOG: | 0PGMT | PGUG_03399 | Splicing factor 3A subunit 3 |
| SGD closest match: | S000002188 | PRP9 | Pre-mRNA-splicing factor PRP9 |
| CGD closest match: | CAL0000180558 | orf19.3178 | SF3a splicing factor complex subunit |
Protein alignments
| %id | Aln length | E-value | ||
|---|---|---|---|---|
| MIA_04588_1 | 56.09% | 649 | 0.0 | MIA_04588_1 |
| A0A0J9XCV5_GEOCN | 52.35% | 659 | 0.0 | Similar to saccharomyces cerevisiae YDL030W PRP9 Subunit of the SF3a splicing factor complex OS=Geotrichum candidum GN=BN980_GECA10s03420g PE=4 SV=1 |
| UniRef50_A0A0J9XCV5 | 52.35% | 659 | 0.0 | Similar to saccharomyces cerevisiae YDL030W PRP9 Subunit of the SF3a splicing factor complex n=1 Tax=Geotrichum candidum TaxID=1173061 RepID=A0A0J9XCV5_GEOCN |
| A0A060SXW9_BLAAD | 42.56% | 632 | 2e-163 | ARAD1A15774p OS=Blastobotrys adeninivorans GN=GNLVRS02_ARAD1A15774g PE=4 SV=1 |
| A0A167D3V1_9ASCO | 40.73% | 658 | 3e-151 | Prp9p OS=Sugiyamaella lignohabitans GN=PRP9 PE=4 SV=1 |
| A0A1E3PEN1_9ASCO | 36.01% | 636 | 1e-113 | Uncharacterized protein OS=Nadsonia fulvescens var. elongata DSM 6958 GN=NADFUDRAFT_67758 PE=4 SV=1 |
| Q6C2A2_YARLI | 31.49% | 651 | 2e-81 | YALI0F09493p OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=YALI0_F09493g PE=4 SV=1 |
| A0A1E4TB24_9ASCO | 39.17% | 411 | 4e-77 | Uncharacterized protein OS=Tortispora caseinolytica NRRL Y-17796 GN=CANCADRAFT_3617 PE=4 SV=1 |
| PRP9_YEAST | 31.24% | 445 | 1e-51 | Pre-mRNA-splicing factor PRP9 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=PRP9 PE=1 SV=1 |
| A0A1D8PNA1_CANAL | 33.51% | 376 | 2e-48 | SF3a splicing factor complex subunit OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=orf19.3178 PE=4 SV=1 |
Mitochondrial localization by mitoprotII
Probability of mitochondrial location: 0.5121
Protein family membership
None predicted.
Domains and repeats
-
Domain
-
Domain
1
100
200
300
400
500
632
Detailed signature matches
no IPR
Unintegrated signatures
-
-
-
-
mobidb-lite (disord...)
Protein sequence
>MCA_01764_1 MSSSVLEAQRSALEELERIETAIADRIVYNPGVLPDSAPLSASSELHGKRKQHFRKSVLQQQEIGRFIKRYKQQCEFLEK SYTPKSALRQQQQLSSSSPDKTVDNDDLDSHPAVLRDRELTAISTTSDARITLLDVFYKQIYYIKEYHRKYPNQQVDDLS QQYQMGIVKLKEQQEMLENGVLLNSIDDADPAQQTAIQALLNAQNLGSNVLLSTIASDIDLDSMFSGEEAYGKYLDLVSF HERYINLPFILEAANEDFAPSSNGASIQAPRIILSKLTYLRYLDIFYDFSNPTYFPVKRKSDKEYFTYASELHQYIRSFF VKRNILENTQTTLQKIEADFENAWTKKIPFSGWRFDDSEKDNLSSSSNKPADGVETPEGFFCTPCNKYFAKETVYKGHLN GKKHIKNAAVYEKENGNGNSSSSSDDETNLRHRLLAFHEYCTFNLIELLQKQVTDTKNNVERKRALTDNERKLEIEALDS QDDLNPAGNKKGKKDSSNDDEDEDEEIIYNPLKLPLGWDGKPIPFWLWKLNGLGIEYSCEICGNYVYMGRKAFEKHFMEA RHVHGLKCLGITQTLLFKGIVNIQDALDLWNKIKRTTRQEEGRRENAVEMEDEEGNVMSEKVYNDLKKQGLL
GO term prediction
Biological Process
None predicted.
Molecular Function
GO:0003676 nucleic acid binding
GO:0008270 zinc ion binding
Cellular Component
GO:0005634 nucleus