Protein
MCA_01753_1
Length
575 amino acids
Description: RNA polymerase II transcription factor SIII, subunit A
Browser: contigA:5379015-5380817+
RNA-seq: read pairs 669, FPKM 14.4, percentile rank 33.1% (100% = highest expression)
Protein function
| Annotation: | RNA polymerase II transcription factor SIII, subunit A | ||
|---|---|---|---|
| EGGNOG: | 0PMRJ | PGUG_02014 | regulation of RNA biosynthetic process |
| SGD closest match: | S000005174 | ELA1 | Elongin-A |
| CGD closest match: | CAL0000185343 | ELA1 | Elongin A |
Protein alignments
| %id | Aln length | E-value | ||
|---|---|---|---|---|
| MIA_01207_1 | 32.20% | 205 | 3e-20 | MIA_01207_1 |
| A0A0J9X3Z9_GEOCN | 29.34% | 334 | 4e-19 | Uncharacterized protein OS=Geotrichum candidum GN=BN980_GECA02s06038g PE=4 SV=1 |
| UniRef50_A0A0J9X3Z9 | 29.34% | 334 | 8e-16 | Uncharacterized protein n=1 Tax=Geotrichum candidum TaxID=1173061 RepID=A0A0J9X3Z9_GEOCN |
| A0A1D8PD64_CANAL | 26.32% | 190 | 7e-16 | Elongin A OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=ELA1 PE=4 SV=1 |
| A0A1E3PCK8_9ASCO | 28.40% | 169 | 2e-14 | Uncharacterized protein OS=Nadsonia fulvescens var. elongata DSM 6958 GN=NADFUDRAFT_53442 PE=4 SV=1 |
| ELOA1_YEAST | 27.44% | 164 | 2e-12 | Elongin-A OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=ELA1 PE=1 SV=1 |
| Q6CBQ6_YARLI | 26.55% | 177 | 1e-11 | YALI0C16500p OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=YALI0_C16500g PE=4 SV=2 |
| A0A1E4TIL8_9ASCO | 26.55% | 177 | 1e-10 | Uncharacterized protein OS=Tortispora caseinolytica NRRL Y-17796 GN=CANCADRAFT_73119 PE=4 SV=1 |
Mitochondrial localization by mitoprotII
Probability of mitochondrial location: 0.0386
Protein family membership
Domains and repeats
None predicted.
Detailed signature matches
no IPR
Unintegrated signatures
-
-
mobidb-lite (disord...)
Protein sequence
>MCA_01753_1 MERGLENSKSKTSNVPSLFEYALEKCSRNLDKIYDLGYVPFQLVERILALMPASQLLDIEEKSPHLKPYTNKIWMKVIKR EFPKHVLETYLKNHDLYGLYIEDQNNESVESAYADPEENESDIENTTSKQNTGIDYRDLYHELTHEMELKLQSASERLRK SMKKVQTERLTNTIVEIDMDPAMRKKRLDMGRKLMPNLNSPIGSSRSLEKSWKNTLTRAIQMSRSTNPSSGYAKISSKSN PYANQFRKTTNTIMNNKPIASINSGNSSRHALAPTFNASSQGSSFPRDTRVAKTEREAFKPTSSLKRKISQDDYNKSKGT AKKIFSLGSTPVPPKSSKPVLSSSSSSSSSSFASSLASINSQKLNAESGSKLGLPKLQVSTGSMRDLQSAQTSPKPYETS SATSNPTILHNGKSHHHISPPSSSVSRSSPLLPTTSSLSKKSPPPLLQSSPSPPSSCHSSSSLSPPKTFQSYDSSPTKSS PDLIPLGTDSSRINSNSVVGAVSSSSSSSSPTSPISPQPPQASLNNVTTESSSSTTSSSQNTSPTTSRPISTNNSNRPKP LRRPVSIFIRPKKRI
GO term prediction
Biological Process
GO:0006355 regulation of transcription, DNA-templated
Molecular Function
None predicted.
Cellular Component
GO:0005634 nucleus
GO:0016021 integral component of membrane