Protein

MCA_01718_1

Length
1,262 amino acids

Description: protein with Zn-finger SWIM-type and PMZ-type domains

Browser: contigA:5272519-5276462-

RNA-seq: read pairs 347, FPKM 3.4, percentile rank 14.5% (100% = highest expression)

Protein function

Annotation:protein with Zn-finger SWIM-type and PMZ-type domains

Protein alignments

%idAln lengthE-value
MIA_04131_130.61%1471e-12MIA_04131_1
A0A0J9YHD5_GEOCN31.19%1093e-06Uncharacterized protein OS=Geotrichum candidum GN=BN980_GECA01s02749g PE=4 SV=1

Mitochondrial localization by mitoprotII

Probability of mitochondrial location: 0.0160

Protein family membership

None predicted.

Domains and repeats

  1. Domain
1 200 400 600 800 1000 1262

Detailed signature matches

  1. Domain IPR007527
    Zinc finger, SWIM-type
    1. PS50966 (ZF_SWIM)
    2. PF04434 (SWIM)
  2. Domain IPR006564
    Zinc finger, PMZ-type
    1. SM00575 (26again6)
Unintegrated signatures no IPR
Unintegrated signatures
  1. CYTOPLASMIC_D... (C...)
  2. NON_CYTOPLASM... (N...)
  3. TRANSMEMBRANE (Tran...)
  4. mobidb-lite (disord...)

Protein sequence

>MCA_01718_1
MNGINRLNSVGESSNSTHEENSNNRISNGNFQRDLPNHAVFSQDKADYHASLGFLDDDPTEKPAKCPIPDLLISSVSTFL
RNGTPSAFKTHDVFNDINEIWNYVKQLYKFQNQLYLDQAESFNELKVQYDKQNVFLRLSLKDLPIFAHCKQKLLGYHIHW
NLQNKKLVYFTRNCSGEHADNDGTFILKCVKRGCPYLLSCKKGKFQKIFRDDAGEYIEIEYCYVKRFVDHTCSSFTESDT
ADLAELNSLWANKKAVEGGPIITNRMIIQQYIKDATKQSESESQSESEPQPQLQLKSQSQISAYHRIEKLYSKFEITQDI
FRMVSFSLQQYYIFIMNRAYLDGSKQYGSYSFPLMTAFRNLLSFHPKFTTNHLSIGKRNIDRYITTTKTLYSDAINLIGN
LFAIFLLICIRMPKTYFVLRYDPVKKLTNATNDQATTFKNTDRDDIMADLDEPEIEESEEEPEEESEEAHDPVTDAEMRR
SIIVKHDSTSFVDNKNLPESIFETAPAFTNTRKINYIPPENETYNFSLSWNQRLVSVSKDFHLSDAELESYRLQNSRFDF
ENRESSILEEESKNLIARLRAKVHSYSYPSLEKCMRLRALKDVQPTIENPNPPSYITFTRCGTINEVAVSLNASVPTEPS
QPSRPQAQAQNHGPVYDFDRRLTERREGQRGLLPRYPVGQYFPDTLLDNIQENISNIVQDRLHLYSGTTRVSTYCQDKSC
DKYLEAYDKYLKTASSDHRTGRNTAKKPNPCCGEISHSMATFITSVLRTFPIDPITLQKKINEKFPLEFRKALQSMSLRK
APYCITEMFIAPDVSLNFVDMLTPILSVNAKFLRTNKYGSYTMYVCTAQTTNYCPVVLAIGFYNKKTTTDEGYSLQLISK
AVAQSLPGVTHYECTNHNISNCLRKVKLVNDNQRKRFVRLFKGLQVVVDQRKASLLHKEMMSMISDSNTANIEYISDLTR
SSYAYANRPRYNQITNSSVKVTNDLMKSVKCDHPWSISRDVFSLVHKQINNEWRNYYNKKHYGVLKYDDKPLIPGLTYSM
SFSIGHIDDYNVDNFENNQNEYVVTLREDSVLMFYFKRFPLFEPTIYPGLHSIYYGPYDDSKKAPIRKTRLNEAFSQKYY
HVDLANHCCSCKFFQQLEYPCIHALKVIMDKKLKVSDYCHKRYHMEFATKVFARHSKEYKNVAKFKIPEMLQAKAATTAS
LKFGTNAGLGQQHEDIFPGKGFKSAQQGGPATVAKNTKRSISACDFPQAGLDSQNKKKRLHT

GO term prediction

Biological Process

None predicted.

Molecular Function

GO:0008270 zinc ion binding

Cellular Component

None predicted.