Protein
MCA_01702_1
Length
159 amino acids
Gene name: NHP2
Description: H/ACA ribonucleoprotein complex subunit 2
Browser: contigA:5230848-5231418+
RNA-seq: read pairs 3425, FPKM 264.5, percentile rank 90.9% (100% = highest expression)
Protein function
| Annotation: | NHP2 | H/ACA ribonucleoprotein complex subunit 2 | |
|---|---|---|---|
| KEGG: | K11129 | NHP2 | H/ACA ribonucleoprotein complex subunit 2 |
| EGGNOG: | 0PQ50 | NHP2 | ribosome biogenesis protein Nhp2 |
| SGD closest match: | S000002367 | NHP2 | H/ACA ribonucleoprotein complex subunit 2 |
| CGD closest match: | CAL0000183079 | NHP2 | SnoRNA-binding protein |
Protein alignments
| %id | Aln length | E-value | ||
|---|---|---|---|---|
| MIA_05897_1 | 91.43% | 140 | 1e-66 | MIA_05897_1 |
| A0A060T642_BLAAD | 87.74% | 106 | 4e-61 | ARAD1B13002p OS=Blastobotrys adeninivorans GN=GNLVRS02_ARAD1B13002g PE=4 SV=1 |
| A0A1E3PQ71_9ASCO | 79.63% | 108 | 2e-57 | L30e-like protein OS=Nadsonia fulvescens var. elongata DSM 6958 GN=NADFUDRAFT_40734 PE=4 SV=1 |
| Q5A6M9_CANAL | 80.29% | 137 | 4e-56 | SnoRNA-binding protein OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=NHP2 PE=4 SV=1 |
| A0A0J9XIE7_GEOCN | 87.05% | 139 | 4e-55 | Similar to Saccharomyces cerevisiae YDL208W NHP2 Nuclear protein related to mammalian high mobility group (HMG) proteins OS=Geotrichum candidum GN=BN980_GECA16s02166g PE=4 SV=1 |
| UniRef50_A0A0L0NPX0 | 76.26% | 139 | 1e-51 | Uncharacterized protein n=9 Tax=Eukaryota TaxID=2759 RepID=A0A0L0NPX0_9ASCO |
| NHP2_YEAST | 75.00% | 108 | 5e-52 | H/ACA ribonucleoprotein complex subunit 2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=NHP2 PE=1 SV=2 |
| Q6C0Y4_YARLI | 75.24% | 105 | 3e-50 | YALI0F20768p OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=YALI0_F20768g PE=4 SV=1 |
| A0A167C1G8_9ASCO | 33.64% | 107 | 3e-18 | RNA binding protein SNU13 OS=Sugiyamaella lignohabitans GN=SNU13 PE=4 SV=1 |
| A0A1E4TBU1_9ASCO | 45.71% | 70 | 7e-17 | Uncharacterized protein OS=Tortispora caseinolytica NRRL Y-17796 GN=CANCADRAFT_135297 PE=4 SV=1 |
Mitochondrial localization by mitoprotII
Probability of mitochondrial location: 0.0382
Protein family membership
- Ribosomal protein L7Ae/L8/Nhp2 family (IPR018492)
Domains and repeats
-
Domain
1
20
40
60
80
100
120
140
159
Detailed signature matches
no IPR
Unintegrated signatures
-
mobidb-lite (disord...)
Protein sequence
>MCA_01702_1 MSKDKSSKSKEKSSDSSSDNYEKRLPALLPFASPLAPKKLNKKILKTVKKASKAKHVRRGVKEVVKALRKGEKGAVVIAG DISPGDVISHLPVLCEDSKVPYVFIPSKEDLGSAGATKRPTSCVMIVPGGSKKKADDASKTEEYREGYDEVVKEIGVIA
GO term prediction
Biological Process
GO:0042254 ribosome biogenesis
Molecular Function
GO:0003723 RNA binding
Cellular Component
GO:0005730 nucleolus
GO:0030529 intracellular ribonucleoprotein complex