Protein

MCA_01663_1

Length
320 amino acids

Description: protein with DDE superfamily endonuclease and DNA-binding HTH (CenpB-type) domains

Browser: contigA:5115311-5116274+

RNA-seq: read pairs 3, FPKM 0.1, percentile rank 3.8% (100% = highest expression)

Protein function

Annotation:protein with DDE superfamily endonuclease and DNA-binding HTH (CenpB-type) domains
EGGNOG:0PQVYFGSG_14035conserved hypothetical protein
CGD closest match:CAL0000183805orf19.4918Uncharacterized protein

Protein alignments

%idAln lengthE-value
UniRef50_A0A0B7KT0326.76%2993e-24Uncharacterized protein n=1 Tax=Bionectria ochroleuca TaxID=29856 RepID=A0A0B7KT03_BIOOC
Q5AL59_CANAL22.68%2911e-21Uncharacterized protein OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=orf19.4918 PE=4 SV=1
MIA_01692_122.97%2966e-17MIA_01692_1
Q6C7B4_YARLI27.05%2073e-11YALI0E02178p OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=YALI0_E02178g PE=4 SV=1

Mitochondrial localization by mitoprotII

Probability of mitochondrial location: 0.0088

Protein family membership

None predicted.

Domains and repeats

  1. Domain
1 50 100 150 200 250 320

Detailed signature matches

  1. Domain IPR006600
    HTH CenpB-type DNA-binding domain
    1. PF03221 (HTH_Tnp_Tc5)
    2. PS51253 (HTH_CENPB)
  2. Domain IPR004875
    DDE superfamily endonuclease domain
    1. PF03184 (DDE_1)

Protein sequence

>MCA_01663_1
MDSSKEDKILAVIAASKAPGNTDTLYQLAKYYGVCYKTVKNRMAGMESKEEASKRRQILTPEEELILQDYIVYLAGKNSI
PSSEVVMKLAGEILRGTYPSAPDPSQTWLENFMKRSRYLNRAKTKTMDQPRIKPNGENLMELFFERLEFYEKKFGVTLDR
AHNLDECGFKVGESTNGAWGICPDSYRTNISYQSSELVTVMEVISATGKILTPLFIYKGQNVMKSWVSGSTNEKVVVATS
GTAFINSDIFLNWFNDHFPELPVWQILILDGCKAHTNIAFHNLALKKRVMPVYLPARRAGKEQEYTLVTFLLRSPSLKGR

GO term prediction

Biological Process

None predicted.

Molecular Function

GO:0003676 nucleic acid binding

Cellular Component

None predicted.