Protein
MCA_01659_1
Length
1,426 amino acids
Description: protein with DNA-binding HTH (Psq-type) domain
Browser: contigA:5094465-5098746-
RNA-seq: read pairs 1900, FPKM 16.5, percentile rank 36.2% (100% = highest expression)
Protein function
| Annotation: | protein with DNA-binding HTH (Psq-type) domain | ||
|---|---|---|---|
| EGGNOG: | 0PQVY | FGSG_14035 | conserved hypothetical protein |
| CGD closest match: | CAL0000183805 | orf19.4918 | Uncharacterized protein |
Protein alignments
| %id | Aln length | E-value | ||
|---|---|---|---|---|
| MIA_05430_1 | 46.30% | 432 | 6e-104 | MIA_05430_1 |
| UniRef50_A0A179EZ58 | 28.35% | 388 | 4e-33 | Transposase n=3 Tax=Pochonia chlamydosporia 170 TaxID=1380566 RepID=A0A179EZ58_METCM |
| Q6C7B4_YARLI | 25.18% | 421 | 1e-20 | YALI0E02178p OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=YALI0_E02178g PE=4 SV=1 |
| Q5AL59_CANAL | 23.35% | 394 | 2e-20 | Uncharacterized protein OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=orf19.4918 PE=4 SV=1 |
| A0A0J9XG26_GEOCN | 22.30% | 453 | 1e-10 | Uncharacterized protein OS=Geotrichum candidum GN=BN980_GECA15s02320g PE=4 SV=1 |
Mitochondrial localization by mitoprotII
Probability of mitochondrial location: 0.0047
Protein family membership
None predicted.
Domains and repeats
-
Domain
1
200
400
600
800
1000
1200
1426
Detailed signature matches
-
-
PF05225 (HTH_psq)
-
no IPR
Unintegrated signatures
-
-
mobidb-lite (disord...)
Protein sequence
>MCA_01659_1 MQQPDFQNDPPNIVDNAGLNIQATTTVSNNLQDHHIHQQQPQLVDSNQITDSSNDSNTSIQATSSSITATTTPTVPSGQE YKFSSEEKIAAALHQIEYNNLTIRGAGRKFGIPESTLRKRKKNGAQSARKAAEKRSRTTEFEDILLSKLFIAYNLLDIQM APKTQMDIVNAFLESKRSLKRVDMIWTHNFIKKNDLRSAKKSISSFPFFQRWHTTGFPPDSFEVWFSNVEEKFVNLNLQP QNVYVMDEIGIISSRHKPNNIDIIKPIDGNDAFFTALETLSMDGRALPPYIVFNSKYQDLITNHQNENSKLTYDWKFTPT ASGWPTDKSAENWLRQHFLPLTKDIAGDNPRALILDSHISHFSMEFLKLAIENNVVFLFLPSDATTPIQPLDSVPYTKFL QKTLSLAKSQSWSYVDNTDMTLLLNLYRSSRLASLTPGNITAGWKETGLSPLDRNIVKKHIIGSNYPLEGPGDNMDIDET SVTNEPLNSSKINATTATTTTTSTIASTSANPNTNSSAAASGTINDSHFKNLPFVITKFCEYESQNNLLFQERATLKSVN STSTDLSQANPPSVAASSDNEISDSQTDVNPIDSPIKLDKVPQSGLQLYKIFYEFSQYLKNVAEYLDNSAGKVAKNELSH RHMVHNLIGKVSLPFEDAHWIAKDLTAREASTLAFRENVAKFKDVIFSAVDWLNTNNPTFLEFFQNEQQLDSVVPTSGQA SSEASPKRKLESNTNNNQNGSMEKRPLTNSQATSYVSETVDGADLHQIKRQCNESTHSRTSSMVNVKLESDHVDGINMNI NSGPTTDQMEQFSSNAAEDSLANANFQQFQDTGISSQNLMSTLSAVSEVMSTQDQVPKSDSTISEINAASIKPTPISQSP NNQYSQTPTHEPSLDAVMSNYNIQNASNQVLHNLELQHQLHDLEQQQQQQHAAMAQGLHNVIQSTSNTNQSSSDQSHSNQ IQMQQTNSQSQMVESSNNSAQQAMTVSSLQSPQGLENVQNINLQDSLQSVQQMQDLQHMPLELAIQLPQGPSNNYEETFN VSALQPDAFSNDQKYQQPQQQQPQAATQQINQKAPQMHDQTNAQPKQQQQQQQTQAMQSPHQTHNHSQQISPAPGIILLP TENNAQGSVKVSSQANVQQGHSQSQVHVQSQNQAHMYSQMELQQRFLQLSNAGAISSSMDNIPLSVPPPPTTATTAAPSI SGTVPSTPTIELGASYPVMSAGNVSNASVPSATSAPPATPVYTQEMASSSPHSHTSSRPHIQLPNDKSFFVFPAQSQSQP ITPLSQLTPTSIPTPIYGLQSQLQQQQQQQSSVNLNEQASQLHQQVLLAQQQAMKNAEKDRKIKEQQQQQLNHQQEQDQQ IQHQLQIQQAQQQAQQQAQQQAHQQAQQQQQQQQQQQQQQQQQQQQQQIQQQFQDQTQKQQQQLQF
GO term prediction
Biological Process
None predicted.
Molecular Function
GO:0003677 DNA binding
Cellular Component
None predicted.