Protein

MCA_01652_1

Length
479 amino acids

Gene name: SEC61A

Description: Protein transport protein SEC61 subunit alpha

Browser: contigA:5079108-5080955+

RNA-seq: read pairs 3377, FPKM 86.9, percentile rank 76.6% (100% = highest expression)

Protein function

Annotation:SEC61AProtein transport protein SEC61 subunit alpha
KEGG:K10956SEC61A protein transport protein SEC61 subunit alpha
EGGNOG:0PFE7SEC61protein transport protein sec61
SGD closest match:S000004370SEC61Protein transport protein SEC61
CGD closest match:CAL0000178942SEC61Protein transport protein SEC61 subunit alpha

Protein alignments

%idAln lengthE-value
MIA_03370_177.04%4790.0MIA_03370_1
A0A0J9X6X6_GEOCN70.50%4780.0Similar to Saccharomyces cerevisiae YBR283C SSH1 Subunit of the Ssh1 translocon complex (Sec61p homolog) OS=Geotrichum candidum GN=BN980_GECA04s02254g PE=3 SV=1
A0A1E3PLJ1_9ASCO57.58%4620.0Essential subunit of Sec61 complex OS=Nadsonia fulvescens var. elongata DSM 6958 GN=NADFUDRAFT_45798 PE=3 SV=1
UniRef50_Q0UDS454.76%4625e-176Uncharacterized protein n=172 Tax=Eukaryota TaxID=2759 RepID=Q0UDS4_PHANO
A0A1E4TGU4_9ASCO54.68%4703e-179Uncharacterized protein OS=Tortispora caseinolytica NRRL Y-17796 GN=CANCADRAFT_31757 PE=3 SV=1
A0A060T4Z8_BLAAD57.08%4662e-177ARAD1B03894p OS=Blastobotrys adeninivorans GN=GNLVRS02_ARAD1B03894g PE=3 SV=1
SC61A_YARLI54.29%4661e-177Protein transport protein SEC61 subunit alpha OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=SEC61 PE=3 SV=2
SC61A_CANAL54.29%4667e-174Protein transport protein SEC61 subunit alpha OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=SEC61 PE=3 SV=2
A0A167DYP3_9ASCO57.18%4329e-169Translocon subunit SEC61 OS=Sugiyamaella lignohabitans GN=SEC61 PE=3 SV=1
SC61A_YEAST53.46%4623e-163Protein transport protein SEC61 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=SEC61 PE=1 SV=1

Mitochondrial localization by mitoprotII

Probability of mitochondrial location: 0.0405

Protein family membership

Domains and repeats

  1. Domain
  2. Domain
1 50 100 150 200 250 300 350 400 450 479

Detailed signature matches

  1. Family IPR002208
    SecY/SEC61-alpha family
    1. PF00344 (SecY)
    2. TIGR00967
    3. PIRSF004557 (SecY_S...)
  2. Domain IPR023201
    SecY subunit domain
    1. SSF103491 (Preprote...)
  3. Domain IPR019561
    Translocon Sec61/SecY, plug domain
    1. PF10559 (Plug_trans...)
Unintegrated signatures no IPR
Unintegrated signatures
  1. CYTOPLASMIC_D... (C...)
  2. G3DSA:1.10.33...
  3. NON_CYTOPLASM... (N...)
  4. TMhelix
  5. TRANSMEMBRANE (Tran...)

Protein sequence

>MCA_01652_1
MSGQLRLLDLVKPFLPIIPEVETPLRKVSYQDKLLWTFGAGLAYFVMCEIPLYGLVSSDSSDPLYWLRSILASNRGTLME
LGTSPIVTAGLIFQLFGGAQLLDVNFDLKSDRELFQSAQKLLAIILTAIQAIAVVFSGLYGSPSELGAGVVTLLVLQLFF
AGVILILIDEVLDKDYGIGPGVPYFTALHVAQTIFWNCFSLQSIDYGRGSEYTGCVIALFHYLWVRKSWKAALVEAFFRQ
HLPNLMQFYATLFTFFVSVYLLTFRIDIPVKSTKVRGNSTTYPIRLFYTGAMPVYLLSSFSSNIFLLSQSLYNQFPSNLL
VRIFGVWDSREGSRQLFAVSGLAYYLQPPFNIYEALWDPIKTILYLIIIVTACSIFAKTWAEISGSSPRDIAKQFKAQGI
SIMGHREVSVVKDLKKIIPVAASVGGALVGLIVFSSDLLGSFGNGTAIFAAITTIQNYFEIFAQEGLGNPGALQQMFKA

GO term prediction

Biological Process

GO:0015031 protein transport

Molecular Function

None predicted.

Cellular Component

GO:0016020 membrane