MCA_01636_1

Browser: contigA:5038624-5039671-

RNA-seq: read pairs 47, FPKM 1.7, percentile rank 10.9% (100% = highest expression)

Protein alignments

Mitochondrial localization by mitoprotII

Probability of mitochondrial location: 0.0878

Protein family membership

None predicted.

Domains and repeats

Detailed signature matches

no IPR

Unintegrated signatures

1. NON_CYTOPLASM... (N...)
   27 - 348

   PHOBIUS
   NON_CYTOPLASMIC_DOMAIN (Non cytoplasmic domain)
2. SIGNAL_PEPTIDE (Sig...)
   1 - 26

   PHOBIUS
   SIGNAL_PEPTIDE (Signal Peptide)
3. SIGNAL_PEPTID... (S...)
   18 - 26

   PHOBIUS
   SIGNAL_PEPTIDE_C_REGION (Signal peptide C-region)
4. SIGNAL_PEPTID... (S...)
   6 - 17

   PHOBIUS
   SIGNAL_PEPTIDE_H_REGION (Signal peptide H-region)
5. SIGNAL_PEPTID... (S...)
   1 - 5

   PHOBIUS
   SIGNAL_PEPTIDE_N_REGION (Signal peptide N-region)
6. SignalP-noTM
   1 - 17

   SignalP euk
   SignalP-noTM (SignalP-noTM)
7. mobidb-lite (disord...)
   64 - 220

   MobiDB Lite
   mobidb-lite (disorder_prediction)

Protein sequence

>MCA_01636_1
MKFSQVAISVFATLAIAAPSPVYVKGSDGKVVPVTVSTTNLPTASFPSYKWCGWKLYKPINDGKDGQDGNGGSNGGNGGS
NGGNGGGNGGNGGGSNGGNGGSNGGNGGSNGGNGGSNGSSGNGNGTTVVTDGEGTTTTTTTNTNNKVNNKTSNTTNNNTS
NTTNNSSTNTANNDNNNGNNNANNNANNNGNNNANDNDNNNANANANTNPNTNVNANGNTNVGVNGNANVNHNLFVAPGG
FITVGKTIPGSVPFTGILGHGGVLFGSGIGAVNVNINGQLQIVPGGAGSIGWSNKDGVVITPGGTKDGVVACPDGKGHEF
LYFGVTCSGQKPVVIPCDEITSVKEKGH

GO term prediction