Protein

MCA_01625_1

Length
729 amino acids

Gene name: APL2

Description: AP-1 complex subunit beta-1

Browser: contigA:5005127-5007477-

RNA-seq: read pairs 4422, FPKM 74.8, percentile rank 74.0% (100% = highest expression)

Protein function

Annotation:APL2AP-1 complex subunit beta-1
EGGNOG:0PFBWAPL2complex. Subunit
SGD closest match:S000001618APL2AP-1 complex subunit beta-1
CGD closest match:CAL0000200918APL2AP complex subunit beta

Protein alignments

%idAln lengthE-value
MIA_00256_174.76%7370.0MIA_00256_1
A0A0J9X556_GEOCN74.73%7320.0AP complex subunit beta OS=Geotrichum candidum GN=BN980_GECA02s08018g PE=3 SV=1
A0A1E3PR67_9ASCO68.21%7330.0AP complex subunit beta OS=Nadsonia fulvescens var. elongata DSM 6958 GN=NADFUDRAFT_48417 PE=3 SV=1
A0A167CTE1_9ASCO66.62%7460.0AP complex subunit beta OS=Sugiyamaella lignohabitans GN=APL2 PE=3 SV=1
A0A060T1N8_BLAAD67.39%6870.0AP complex subunit beta OS=Blastobotrys adeninivorans GN=GNLVRS02_ARAD1C26136g PE=3 SV=1
Q6C0U1_YARLI66.41%6460.0AP complex subunit beta OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=YALI0_F21769g PE=3 SV=1
UniRef50_A0A0K8LBQ664.79%6390.0AP-2 complex subunit beta n=4 Tax=leotiomyceta TaxID=716546 RepID=A0A0K8LBQ6_9EURO
A0A1E4THG3_9ASCO53.33%6300.0AP complex subunit beta OS=Tortispora caseinolytica NRRL Y-17796 GN=CANCADRAFT_25034 PE=3 SV=1
A0A1D8PJI6_CANAL53.18%6280.0AP complex subunit beta OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=APL2 PE=3 SV=1
AP1B1_YEAST40.13%7557e-175AP-1 complex subunit beta-1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=APL2 PE=1 SV=1

Mitochondrial localization by mitoprotII

Probability of mitochondrial location: 0.1363
Predicted cleavage: 14

Protein family membership

Domains and repeats

  1. Domain
1 100 200 300 400 500 600 729

Detailed signature matches

  1. Family IPR016342
    AP-1, 2,4 complex subunit beta
    1. PIRSF002291 (Beta_a...)
  2. Domain IPR016024
    Armadillo-type fold
    1. SSF48371 (ARM repeat)
  3. Domain IPR011989
    Armadillo-like helical
    1. G3DSA:1.25.10.10
  4. Domain IPR002553
    Clathrin/coatomer adaptor, adaptin-like, N-terminal
    1. PF01602 (Adaptin_N)
Unintegrated signatures no IPR
Unintegrated signatures
  1. mobidb-lite (disord...)

Protein sequence

>MCA_01625_1
MSLEKRIRSVFRTPPKGETYELRQGLVSQYASERKEAIERTISAMTVGKDVSALFPDVLKNIATHDLEQKKLVYLYLMNY
AKTHPELCILAVNTFVQDSEDPNPLVRALAIRTMGCIRVDKMVDYMELPLRKTLKDENPYVRKTAAICVGKLFDLNPELC
IEEGFVADLQNLLYDNNPMVVANTVSALAEIQEAAPETNSLVITSKTLDKLLAALNECTEWGRIAILTALSQYKAANQKE
AINIVDRVVPQFQHVNPSVVLAAIKTVIAHLDLQTPDFRETLLAKMGPPLVTLVSSAPEVQYVALRNIQIILQKFPNILS
RELRVFFCKYNDPPYLKMEKLEILVNIASAKNYEQLLSELKEYSMEVDMDFVRRSIKAIGQVAIKIDKAAPSCVNVLLEL
LDNKANYVVQEVVVVMKDILRKYKNFGAAIPSLVQFIDDLDEPESRAAIIWIMGEYAEDIDNVVEVLQNYVSGFNDESSQ
VQLQLLTTCVKVYIKKPEIGQQIIQQVLQSATNQSENADVRDRGYIYWRLLSSDTAVAKDVILAEKPPLSSTIEPIPTRL
LNELIGELSTLASVYHKPSSSFMGSGRFGAAEVRKRAIEEQKQLAKEDFAGAVAQGVNAENLLDLDFDDSGSAGGQTGSS
SNNGLGELTDLFTSVTAQPAAASGNSNGDILSLFGSTPAAPAAAPSSNVSSTASAFADLNISQPSSSNGSGAANKPASSN
PNEDLLSLF

GO term prediction

Biological Process

GO:0006886 intracellular protein transport
GO:0015031 protein transport
GO:0016192 vesicle-mediated transport

Molecular Function

GO:0005488 binding
GO:0008565 protein transporter activity

Cellular Component

GO:0030117 membrane coat