Protein
MCA_01589_1
Length
393 amino acids
Gene name: MRPL3
Description: 54S ribosomal protein L3, mitochondrial
Browser: contigA:4912203-4913385-
RNA-seq: read pairs 3769, FPKM 118.2, percentile rank 81.6% (100% = highest expression)
Protein function
| Annotation: | MRPL3 | 54S ribosomal protein L3, mitochondrial | |
|---|---|---|---|
| EGGNOG: | 0PFDN | FG01970.1 | mitochondrial 54S ribosomal protein YmL3 |
| SGD closest match: | S000004626 | MRPL3 | 54S ribosomal protein L3, mitochondrial |
| CGD closest match: | CAL0000175974 | MRPL3 | Mitochondrial 54S ribosomal protein YmL3 |
Protein alignments
| %id | Aln length | E-value | ||
|---|---|---|---|---|
| MIA_00236_1 | 66.47% | 340 | 1e-167 | MIA_00236_1 |
| A0A0J9XL81_GEOCN | 61.13% | 355 | 1e-151 | Similar to Saccharomyces cerevisiae YMR024W MRPL3 Mitochondrial ribosomal protein of the large subunit OS=Geotrichum candidum GN=BN980_GECA26s00879g PE=4 SV=1 |
| UniRef50_A0A0J9XL81 | 61.13% | 355 | 2e-148 | Similar to Saccharomyces cerevisiae YMR024W MRPL3 Mitochondrial ribosomal protein of the large subunit n=1 Tax=Geotrichum candidum TaxID=1173061 RepID=A0A0J9XL81_GEOCN |
| A0A167DAL8_9ASCO | 46.32% | 380 | 5e-115 | Mitochondrial 54S ribosomal protein YmL3 OS=Sugiyamaella lignohabitans GN=MRPL3 PE=4 SV=1 |
| A0A060T3N2_BLAAD | 48.22% | 309 | 7e-98 | ARAD1C40986p OS=Blastobotrys adeninivorans GN=GNLVRS02_ARAD1C40986g PE=4 SV=1 |
| A0A1E3PFN3_9ASCO | 44.22% | 398 | 5e-94 | Uncharacterized protein OS=Nadsonia fulvescens var. elongata DSM 6958 GN=NADFUDRAFT_83775 PE=4 SV=1 |
| Q6C8P0_YARLI | 40.62% | 352 | 7e-71 | YALI0D18150p OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=YALI0_D18150g PE=4 SV=1 |
| RM03_YEAST | 36.32% | 391 | 1e-68 | 54S ribosomal protein L3, mitochondrial OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=MRPL3 PE=1 SV=2 |
| A0A1E4TJI9_9ASCO | 35.24% | 315 | 7e-59 | Uncharacterized protein OS=Tortispora caseinolytica NRRL Y-17796 GN=CANCADRAFT_30178 PE=4 SV=1 |
| Q5A798_CANAL | 34.83% | 333 | 5e-57 | Mitochondrial 54S ribosomal protein YmL3 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=MRPL3 PE=4 SV=1 |
Mitochondrial localization by mitoprotII
Probability of mitochondrial location: 0.9990
Predicted cleavage: 45
Protein family membership
None predicted.
Domains and repeats
-
Domain
1
50
100
150
200
250
300
350
393
Detailed signature matches
no IPR
Unintegrated signatures
Residue annotation
-
dsRNA binding site...
Protein sequence
>MCA_01589_1 MSSQAKLSVSKRLLLSGRNSILRSVQTRRALSTTRFLSQQTQNSNEPALSQVSNNELNSIPSNITDFGAYWRKDKLEPIP VSEAAKSPSLIALQARLKLTNLVPLDTLARTLICQSAHSKYLDNLSMASFGKNLLNFYIYEHFMVKYPRLTPVVLQQVSD IFLSTSSLAEVALSWGVEEDSRSALERYLEDGPSIDLNGVDSEGAPTLIANTNNLFGKLRYSPSSVRRENGVVELLSGND IQHGRNGALATFVRALVSAIYSHNDLATTQTFIHEYIIKPKKIDLSSLLVFEQPTRELSRLCAREGLKAPVSRLLVESGR LSSHPVFVVGVFSGSDKLGEGQGASLVEAKTRAAVNALKGWYLFSPLDAQLPSSTSETEEFKGAYVDSGSVIV
GO term prediction
Biological Process
GO:0006396 RNA processing
Molecular Function
GO:0004525 ribonuclease III activity
Cellular Component
None predicted.