Protein

MCA_01582_1

Length
125 amino acids


Browser: contigA:4890725-4891103-

RNA-seq: read pairs 650, FPKM 63.7, percentile rank 70.6% (100% = highest expression)

Protein function

KEGG:K12834PHF5A PHD finger-like domain-containing protein 5A
EGGNOG:0PP1GFG06746.1factor ini1
SGD closest match:S000006298RDS3Pre-mRNA-splicing factor RDS3
CGD closest match:CAL0000192121orf19.2230U2 snRNP complex subunit

Protein alignments

%idAln lengthE-value
MIA_02478_171.77%1241e-61MIA_02478_1
A0A1E3PE29_9ASCO63.41%1233e-57Pre-mRNA-splicing factor ini1 OS=Nadsonia fulvescens var. elongata DSM 6958 GN=NADFUDRAFT_47983 PE=4 SV=1
A0A060T2R9_BLAAD62.90%1243e-54ARAD1A10692p OS=Blastobotrys adeninivorans GN=GNLVRS02_ARAD1A10692g PE=4 SV=1
UniRef50_A0A1U7LLP964.17%1204e-48PHD finger-like domain-containing protein 5B n=3 Tax=Fungi TaxID=4751 RepID=A0A1U7LLP9_9ASCO
Q6CCN2_YARLI59.84%1221e-49YALI0C08030p OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=YALI0_C08030g PE=4 SV=1
A0A0J9X524_GEOCN60.94%1282e-48Similar to Saccharomyces cerevisiae YPR094W RDS3 Component of the SF3b subcomplex of the U2 snRNP OS=Geotrichum candidum GN=BN980_GECA02s01990g PE=4 SV=1
A0A1E4TK35_9ASCO53.85%1171e-41Uncharacterized protein OS=Tortispora caseinolytica NRRL Y-17796 GN=CANCADRAFT_21518 PE=4 SV=1
RDS3_YEAST50.42%1191e-36Pre-mRNA-splicing factor RDS3 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=RDS3 PE=1 SV=1
Q59Z68_CANAL46.77%1241e-33U2 snRNP complex subunit OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=orf19.2230 PE=4 SV=1

Mitochondrial localization by mitoprotII

Probability of mitochondrial location: 0.0302
Predicted cleavage: 19

Protein family membership

Domains and repeats

None predicted.

Detailed signature matches

    1. PF03660 (PHF5)

Protein sequence

>MCA_01582_1
MSRHRPDLIMCMKQPGRHVGRLCEKCEDRCPICDSFVRPTTLVKICEECAFQTASDQPNQQQQDGTATSGKCIMCGGPGV
SDAYYCYECTMLERDRDGCPKIINVGSSRSDLWYEKKKTKQQQQL

GO term prediction

Biological Process

None predicted.

Molecular Function

None predicted.

Cellular Component

None predicted.