MCA_01565_1
Gene name: POP4
Description: RNases MRP/P 32.9 kDa subunit
Browser: contigA:4845503-4846556-
RNA-seq: read pairs 256, FPKM 9.0, percentile rank 24.3% (100% = highest expression)
Protein function
| Annotation: | POP4 | RNases MRP/P 32.9 kDa subunit | |
|---|---|---|---|
| KEGG: | K03538 | POP4 | ribonuclease P protein subunit POP4 [EC:3.1.26.5] |
| EGGNOG: | 0PP39 | PGUG_03515 | ribonuclease P complex subunit Pop4 |
| SGD closest match: | S000000461 | POP4 | RNases MRP/P 32.9 kDa subunit |
| CGD closest match: | CAL0000177017 | POP4 | RNase P/RNase MRP complex subunit |
Protein alignments
| %id | Aln length | E-value | ||
|---|---|---|---|---|
| A0A0J9XIC8_GEOCN | 40.00% | 335 | 1e-65 | Similar to Saccharomyces cerevisiae YBR257W POP4 Subunit of both RNase MRP and nuclear RNase P OS=Geotrichum candidum GN=BN980_GECA20s00549g PE=4 SV=1 |
| UniRef50_A0A0J9XIC8 | 40.00% | 335 | 3e-62 | Similar to Saccharomyces cerevisiae YBR257W POP4 Subunit of both RNase MRP and nuclear RNase P n=1 Tax=Geotrichum candidum TaxID=1173061 RepID=A0A0J9XIC8_GEOCN |
| MIA_02456_1 | 31.53% | 406 | 6e-53 | MIA_02456_1 |
| A0A167FT26_9ASCO | 33.33% | 309 | 4e-43 | Pop4p OS=Sugiyamaella lignohabitans GN=POP4 PE=4 SV=1 |
| Q6CD49_YARLI | 30.75% | 348 | 5e-39 | YALI0C03784p OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=YALI0_C03784g PE=4 SV=1 |
| A0A1E3PSL0_9ASCO | 31.78% | 343 | 8e-37 | RNase P/MRP, p29 subunit OS=Nadsonia fulvescens var. elongata DSM 6958 GN=NADFUDRAFT_49043 PE=4 SV=1 |
| A0A1D8PQ05_CANAL | 26.53% | 343 | 8e-30 | RNase P/RNase MRP complex subunit OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=POP4 PE=4 SV=1 |
| A0A060T4K4_BLAAD | 31.98% | 172 | 2e-23 | ARAD1A18304p OS=Blastobotrys adeninivorans GN=GNLVRS02_ARAD1A18304g PE=4 SV=1 |
| POP4_YEAST | 28.82% | 229 | 9e-22 | RNases MRP/P 32.9 kDa subunit OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=POP4 PE=1 SV=1 |
| A0A1E4TAL2_9ASCO | 33.78% | 148 | 4e-16 | Uncharacterized protein (Fragment) OS=Tortispora caseinolytica NRRL Y-17796 GN=CANCADRAFT_14814 PE=3 SV=1 |
Mitochondrial localization by mitoprotII
Probability of mitochondrial location: 0.0983
Protein family membership
- Ribonuclease P/MRP, p29 subunit (IPR016848)
Domains and repeats
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Domain
Detailed signature matches
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PIRSF027081 (RPP29)
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-
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SSF101744 (Rof/RNas...)
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no IPR
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mobidb-lite (disord...)
Protein sequence
>MCA_01565_1 MSNSKSAKQGAKTLNLEIETQLLQNVHGISSNAEAPNAKIDNILAERYSLQGNQKPILMLEPAQPRQDEIDAQNARKQAI RDKKKSERDLHSRTLKLKHDRMKSAPNNLKLVNKKSHIRHSRLQHARHGLNEYIQKCKKNQTKLELLVRKSQTKNNSDIL PSDWWHADKLQFEYEIPTFEQFLPLNALWNDHITDLLFPNYTKDENKEENTLHKDLVLAAKLASADFHGAYVKVTQATNP SNVGMTGIIIWEAKSNFVIVVPSNPSSPRIKEKIGGLRIVEKRGSVFKFTVMKRHLDDNDNNDNNENNEKDKDKDNDSTM DFEIVGSRFIYRTSERSTKKFKPKSVLDLI
GO term prediction
Biological Process
GO:0006364 rRNA processing
GO:0006379 mRNA cleavage
GO:0008033 tRNA processing
Molecular Function
GO:0003723 RNA binding
GO:0004540 ribonuclease activity
Cellular Component
GO:0000172 ribonuclease MRP complex
GO:0005655 nucleolar ribonuclease P complex
GO:0030677 ribonuclease P complex