Protein
MCA_01518_1
Length
1,335 amino acids
Browser: contigA:4700272-4704385+
RNA-seq: read pairs 3733, FPKM 34.5, percentile rank 56.7% (100% = highest expression)
Protein function
| KEGG: | K11756 | RSC1_2 | chromatin structure-remodeling complex subunit RSC1/2 |
|---|---|---|---|
| EGGNOG: | 0PFM0 | FG07964.1 | complex subunit RSC1 |
| SGD closest match: | S000003288 | RSC1 | Chromatin structure-remodeling complex subunit RSC1 |
| CGD closest match: | CAL0000192923 | orf19.2964 | Uncharacterized protein |
Protein alignments
| %id | Aln length | E-value | ||
|---|---|---|---|---|
| MIA_02785_1 | 71.78% | 411 | 0.0 | MIA_02785_1 |
| A0A0J9XCF9_GEOCN | 71.07% | 363 | 0.0 | Similar to Saccharomyces cerevisiae YGR056W RSC1 (Ohnolog of YLR357W) Component of the RSC chromatin remodeling complex (Partial) (Fragment) OS=Geotrichum candidum GN=BN980_GECA09s01192g PE=4 SV=1 |
| UniRef50_A0A0J9XCF9 | 71.07% | 363 | 0.0 | Similar to Saccharomyces cerevisiae YGR056W RSC1 (Ohnolog of YLR357W) Component of the RSC chromatin remodeling complex (Partial) (Fragment) n=2 Tax=Saccharomycetales TaxID=4892 RepID=A0A0J9XCF9_GEOCN |
| A0A060TAM7_BLAAD | 71.39% | 367 | 0.0 | ARAD1B07876p OS=Blastobotrys adeninivorans GN=GNLVRS02_ARAD1B07876g PE=4 SV=1 |
| A0A1E3PRS6_9ASCO | 70.67% | 358 | 8e-176 | Bromodomain-containing protein OS=Nadsonia fulvescens var. elongata DSM 6958 GN=NADFUDRAFT_68435 PE=4 SV=1 |
| Q6C8C8_YARLI | 63.56% | 376 | 8e-163 | YALI0D20702p OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=YALI0_D20702g PE=4 SV=1 |
| A0A167FBJ7_9ASCO | 58.12% | 351 | 3e-139 | Rsc2p OS=Sugiyamaella lignohabitans GN=RSC2 PE=4 SV=1 |
| A0A1E4TJ18_9ASCO | 52.37% | 338 | 2e-116 | Uncharacterized protein OS=Tortispora caseinolytica NRRL Y-17796 GN=CANCADRAFT_30088 PE=4 SV=1 |
| RSC1_YEAST | 48.38% | 339 | 2e-94 | Chromatin structure-remodeling complex subunit RSC1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=RSC1 PE=1 SV=1 |
| A0A1D8PCV8_CANAL | 43.70% | 341 | 4e-86 | Uncharacterized protein OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=orf19.2964 PE=4 SV=1 |
Mitochondrial localization by mitoprotII
Probability of mitochondrial location: 0.5812
Predicted cleavage: 13
Protein family membership
None predicted.
Domains and repeats
-
Domain
1
200
400
600
800
1000
1200
1335
Detailed signature matches
-
-
PS00633 (BROMODOMAIN_1)
-
no IPR
Unintegrated signatures
-
-
-
cd04717 (BAH_polybromo)
-
mobidb-lite (disord...)
Protein sequence
>MCA_01518_1 MSPIRSRRSTRGSASAGSSTSQEEEAVDHEESVGTIATTKTPRRAALNSSESNNNTTTTPTKPSTPVKRADTSITKTLRP HFEKIYTLKDADGDEISPVFQTLPPRSLTQYFKVIQRPMSLFLIKTNLNHNKYTSPSGFIRDLVQITWNARLFNLKKSEI YEYALILDRYIHEVIEKLKATKKFSPAELEYPDLGPLPDGDEEEIGEDEEGEEEENVDKSLKPKRGPGRKPRASNNDDDD DDEDEDEDDEEDEDDDEEEEEEDDDDEDAKKPAKRGRPPRNSVGRKKRKTSIEPDSSANEKRKKRGRPPTVDKPHEHRIK AIMRGIRKIKEPGTMRLIYPDFEKLPDPKVSPEYYAEVQDPIGLDTIRKNIKRRKYPTVDLFLNDMRRMFYNAKLIHGEG SVIYNEAVLLEQHMDNLTKDELAKPDSVYQDPDANSKISRLPLDNVEHNGVLYRVGDWVHIRNPNQGEKPIIGQIFRMWR ASDGNEWINACWYYRPEQTVHKYDKLFYENEVVKSGQYRDHLVADIIDKCFVMFFTKYQRGRPKGIGNGMVYCCESRYNE NEKIFNKIRTWKACIPDEIRSTDYPMDLFDRVVPLRRVASPIKHLLKKNARDDDPIPEPTMGATNAPPLIGAVYKRPYDP ADPPEQPTPVDPNEKPPGFISSPDQKQRVFRTPSVSNMSSQAAAAAAMSPDRHSPMKTQQQQQQFQQRQMQQKFQQQQQQ QVHSRSQSVSSTGGRQTPTSQMQFRNQMSPPATPGTPGTPGTPINATLQLPNQQTSQQYIANNGMRFQQVPPQSAPKQTG IPPPGTPMVAGPNGIPVPAMNGMAPQFIMGPNGMPVPVAGGNRGYPVQHQQQMQQQQQQQQQQQYSQMMPMQGPMMGQFM QNTPYGVAYQQVGFNPQMPIPSPLPGHIVNGGMTPQQQQQLLANMPPSAQAVAQAVVPPPQAPNNFITSPPHQMNPPQNH QQQQPPQQIQSPSPSMQQKQPQIYQQSQIPGIPQSMSPVVPGMVPAPGPPTPVPYIQAPPSSTPGGVYNPQQFAQAGVNP PAGPLVVQPSASPPQPALAPAVARTNGPPQYPPGLTAQQQAAAAHAAQAAFHNPQQMQQQSQQSSQMAASRMQMPPHAQI PPKSIQPPIQAAQNPSRTVSKQPQFPPTQITIKGRDGQTIIPTAFTIPETSPDGPAPELTLNYPDDSPLAKLNIVLQKPP EPNGAPANGTIEKVMVAWFPTPPIYVARHHVSDPVGRNISGLVFEKRKEEHAEDNEDKEHEETPNGSVNKETEQGEDEQN EQLSPESLQKLQQLEDEQRGTFVLGHSAKYLAWKRAKLAAAPASKATTAKVTEVK
GO term prediction
Biological Process
None predicted.
Molecular Function
GO:0003682 chromatin binding
GO:0005515 protein binding
Cellular Component
None predicted.