Protein
MCA_01494_1
Length
838 amino acids
Gene name: NUP84
Description: Nucleoporin NUP84
Browser: contigA:4626806-4629397+
RNA-seq: read pairs 2430, FPKM 35.8, percentile rank 57.6% (100% = highest expression)
Protein function
| Annotation: | NUP84 | Nucleoporin NUP84 | |
|---|---|---|---|
| KEGG: | K14301 | NUP107 | nuclear pore complex protein Nup107 |
| EGGNOG: | 0PM2X | NUP84 | nuclear pore complex protein |
| SGD closest match: | S000002274 | NUP84 | Nucleoporin NUP84 |
| CGD closest match: | CAL0000183841 | NUP84 | Nup84p |
Protein alignments
| %id | Aln length | E-value | ||
|---|---|---|---|---|
| MIA_06273_1 | 36.67% | 829 | 2e-163 | MIA_06273_1 |
| A0A0J9XK66_GEOCN | 32.94% | 841 | 1e-142 | Similar to Saccharomyces cerevisiae YDL116W NUP84 Subunit of the nuclear pore complex (NPC) OS=Geotrichum candidum GN=BN980_GECA24s00571g PE=4 SV=1 |
| UniRef50_A0A0J9XK66 | 32.94% | 841 | 3e-139 | Similar to Saccharomyces cerevisiae YDL116W NUP84 Subunit of the nuclear pore complex (NPC) n=1 Tax=Geotrichum candidum TaxID=1173061 RepID=A0A0J9XK66_GEOCN |
| A0A060T2J3_BLAAD | 28.93% | 871 | 2e-120 | ARAD1A02002p OS=Blastobotrys adeninivorans GN=GNLVRS02_ARAD1A02002g PE=4 SV=1 |
| A0A1E3PJM7_9ASCO | 28.17% | 859 | 6e-88 | Nuclear pore protein 84/107 OS=Nadsonia fulvescens var. elongata DSM 6958 GN=NADFUDRAFT_42346 PE=4 SV=1 |
| Q6C9R3_YARLI | 29.31% | 655 | 1e-79 | YALI0D08998p OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=YALI0_D08998g PE=4 SV=1 |
| A0A161HF90_9ASCO | 29.96% | 484 | 3e-72 | Nup84p OS=Sugiyamaella lignohabitans GN=NUP84 PE=4 SV=1 |
| A0A1E4TCK8_9ASCO | 29.89% | 552 | 2e-66 | Uncharacterized protein (Fragment) OS=Tortispora caseinolytica NRRL Y-17796 GN=CANCADRAFT_12559 PE=4 SV=1 |
| NUP84_YEAST | 27.29% | 612 | 7e-58 | Nucleoporin NUP84 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=NUP84 PE=1 SV=1 |
| A0A1D8PLW7_CANAL | 30.74% | 514 | 2e-43 | Nup84p OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=NUP84 PE=4 SV=1 |
Mitochondrial localization by mitoprotII
Probability of mitochondrial location: 0.0894
Protein family membership
- Nuclear pore protein 84/107 (IPR007252)
Domains and repeats
None predicted.
Detailed signature matches
-
-
PF04121 (Nup84_Nup100)
-
no IPR
Unintegrated signatures
Protein sequence
>MCA_01494_1 MPEPLDSSINDQSLLINYAQVLEKSKFDEYQDPFDCVKEFNQISNFFALNYGEAFGIESEEYKSFDLEGRLWSLVDFLIK YRTEDLPPTSPIYPFSSSATIIDNLIVTDKSFGESSVLIRWLQNSLPLPEEPKTIHGTKWFNTSHYLKHTTKKNQTIIDH LDEDAPLREKKLIAAEDRSIESEYFKYIFKLLQANQLKTAHEFCEQTGNQTLALLLNGISYYFDPEIDDRDNDNDKNYSK KPYGIINKPLWRRMCWNLSQNPDLDDYERAIYGILSSDINTVINLSDTWELQLLTYLNYLFTTKSEQELINNGRIDSIVK DMPIVTDNITSIQNILERLERSNDELIHRQAAHPYRRIIAAIIKDDLPKIVNDTSNAIVELLNSPEIERDNEEIKETIRI LVHLVLFNQIINRDCGEEKSINTLLLAYTEILLNNFQYQLIPLYVSFIKGPDAIVNYAFLLSKIEDPDQRLMQISLAHKY DLDLKRSVRYAVHNYIFPRDITISTNLPIEFHDNVSEFDLAWMKGVKWFEDASMWFDSVYSSITLYRMLLGDGKWKSAQQ FSQLVSPQNVISRLDAQDIGFQAMARNTNSDDEADEEENLRNDTKKEITPIMRSELLEYAKLIDCFDLIETWKESYEKGT TSGTIIGATPAPTSPFGHTRKGSGFSLASATTTPKRTADSVANARVSVLWKRDATNLANKLVDSIQTLCETWMVDVIESC KYALGEINDDDDDNEIDFSYEVPTNKEVYFKQTLVKAIRLRTIYIPYLIDQLMTILIQAQHASLNFLRVAANLATFVASE DYRLYELLAECNMLKQFLLKVADACADGVIKGEKGIFV
GO term prediction
Biological Process
GO:0006810 transport
Molecular Function
None predicted.
Cellular Component
GO:0005643 nuclear pore