Protein
MCA_01489_1
Length
489 amino acids
Browser: contigA:4615041-4616511-
RNA-seq: read pairs 1129, FPKM 28.5, percentile rank 51.2% (100% = highest expression)
Protein function
| EGGNOG: | 0PJIH | FG10156.1 | RNA binding protein Rnp24 |
|---|---|---|---|
| SGD closest match: | S000005119 | NOP13 | Nucleolar protein 13 |
| CGD closest match: | CAL0000196304 | NOP13 | Nop13p |
Protein alignments
| %id | Aln length | E-value | ||
|---|---|---|---|---|
| MIA_06255_1 | 55.74% | 418 | 8e-124 | MIA_06255_1 |
| A0A0J9X4B0_GEOCN | 41.86% | 430 | 3e-84 | Similar to Saccharomyces cerevisiae YNL175C NOP13 Nucleolar protein found in preribosomal complexes OS=Geotrichum candidum GN=BN980_GECA01s07985g PE=4 SV=1 |
| UniRef50_A0A0J9X4B0 | 41.86% | 430 | 6e-81 | Similar to Saccharomyces cerevisiae YNL175C NOP13 Nucleolar protein found in preribosomal complexes n=2 Tax=Saccharomycetales TaxID=4892 RepID=A0A0J9X4B0_GEOCN |
| A0A167CWY9_9ASCO | 44.29% | 359 | 3e-83 | Nop13p OS=Sugiyamaella lignohabitans GN=NOP13 PE=4 SV=1 |
| A0A1E3PNP1_9ASCO | 39.08% | 371 | 4e-75 | Uncharacterized protein OS=Nadsonia fulvescens var. elongata DSM 6958 GN=NADFUDRAFT_49378 PE=4 SV=1 |
| NOP13_YEAST | 40.52% | 348 | 7e-72 | Nucleolar protein 13 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=NOP13 PE=1 SV=2 |
| A0A060T9F3_BLAAD | 38.03% | 355 | 2e-69 | ARAD1D17468p OS=Blastobotrys adeninivorans GN=GNLVRS02_ARAD1D17468g PE=4 SV=1 |
| Q5ADS5_CANAL | 40.50% | 363 | 5e-68 | Nop13p OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=NOP13 PE=4 SV=1 |
| Q6CHX5_YARLI | 36.13% | 346 | 4e-59 | YALI0A03773p OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=YALI0_A03773g PE=4 SV=1 |
| A0A1E4TF24_9ASCO | 26.52% | 264 | 2e-17 | Uncharacterized protein OS=Tortispora caseinolytica NRRL Y-17796 GN=CANCADRAFT_105910 PE=4 SV=1 |
Mitochondrial localization by mitoprotII
Probability of mitochondrial location: 0.0393
Protein family membership
None predicted.
Domains and repeats
-
Domain
1
50
100
150
200
250
300
350
400
450
489
Detailed signature matches
no IPR
Unintegrated signatures
-
-
-
mobidb-lite (disord...)
Protein sequence
>MCA_01489_1 MGKSKSVESQELSGDESPIIEKTEKKEKKEKKEKKEKKEKKEKKEKKDKKRKREAEQEENNSENDDSSSEKEESKEDVIE IDLSKPTPLSKKQKRLLKKGKDVDSKISKKKRAKHDSIIDLVQEEEEVEEEKKEEDETQKSKKRSEYGIWIGNLSYTTTP ADLQKFFVGETAKYGSDKKKKEDTSSNNGSDSESDSENESGSEDEKDNSSKQPKLVSIRFKDITRVRMPMSKFKKTNNQG FAYVDFRTEEQANTAISLSESMLNGRKVLIKNSKSYEGRPEGDMANAALKQQRSKEYPNMYIAPGATENPPTRILFVGNL SFDTTEEKLEQHFRHCGQITKIRMATFQDSGKCKGFAFVDFLNVEGPTKALKDRSLQRLDGRPIKMQFGEDRSKRTKQDK MMTRQRVLEQANGTTDSNTTEAPRKEEENHHTNTKSEWSQSKAVTPKRKKFGRDDRDDNKRLKPGLALATAQRGKVSIVQ STGKKITFD
GO term prediction
Biological Process
None predicted.
Molecular Function
GO:0003676 nucleic acid binding
Cellular Component
None predicted.