Protein

MCA_01487_1

Length
349 amino acids

Browser: contigA:4611603-4612653-

RNA-seq: read pairs 183, FPKM 6.5, percentile rank 19.7% (100% = highest expression)

Protein alignments

%idAln lengthE-value
MIA_00640_126.94%2714e-29MIA_00640_1
A0A060TCJ6_BLAAD22.97%2967e-16ARAD1B24332p OS=Blastobotrys adeninivorans GN=GNLVRS02_ARAD1B24332g PE=4 SV=1
A0A0J9X8R3_GEOCN35.16%911e-09Uncharacterized protein OS=Geotrichum candidum GN=BN980_GECA06s00395g PE=4 SV=1
A0A167DB59_9ASCO23.12%3207e-09Uncharacterized protein OS=Sugiyamaella lignohabitans GN=AWJ20_971 PE=4 SV=1
A0A1E3PMN4_9ASCO33.33%842e-08Uncharacterized protein OS=Nadsonia fulvescens var. elongata DSM 6958 GN=NADFUDRAFT_82439 PE=4 SV=1
A0A1E4TK05_9ASCO34.25%738e-08Uncharacterized protein OS=Tortispora caseinolytica NRRL Y-17796 GN=CANCADRAFT_82174 PE=4 SV=1

Mitochondrial localization by mitoprotII

Probability of mitochondrial location: 0.2145

Protein family membership

Domains and repeats

  1. Domain
  2. Domain
1 50 100 150 200 250 300 349

Detailed signature matches

  1. Family IPR011513
    Non-structural maintenance of chromosomes element 1
    1. PF07574 (SMC_Nse1)
  2. Domain IPR013083
    Zinc finger, RING/FYVE/PHD-type
    1. G3DSA:3.30.40.10
  3. Domain IPR014857
    Zinc finger, RING-like
    1. PF08746 (zf-RING-like)
Unintegrated signatures no IPR
Unintegrated signatures
  1. Coil
  2. mobidb-lite (disord...)

Protein sequence

>MCA_01487_1
MSQAAYSQEPPTSDQLSDHIANIKDYPVITQTFLQCVMSSRGLTNAQGLLDQIITNMFVESRVIAKGQPISTLIEDSDRK
LKKAMTEVVRKINLDLSRLELNIKAVRDQQTGNEMLVFVNLQASPSTAMATLMGAPEIDIIKKMVSSMFSRISGAADSYF
VTPIHVVEATRTIGSISRNAALEKLLLFVETGWFIEIPMGSHVRYIESYLTSLPASAMHTNNNQAEANGSTQQANQHEND
LEEDYSNEQIMVGTPGRNLQAFTLSARAIAELERYLISNFGADSAFNTLKTCKGCNAIFTIGLKCPSCAVRYHVHCYNRY
IEMTNQTSCQGCGVPLSSFEHVNTPNRIN

GO term prediction

Biological Process

GO:0006281 DNA repair

Molecular Function

None predicted.

Cellular Component

GO:0030915 Smc5-Smc6 complex