Protein

MCA_01472_1

Length
355 amino acids

Browser: contigA:4559722-4560883-

RNA-seq: read pairs 2114, FPKM 73.4, percentile rank 73.6% (100% = highest expression)

Protein alignments

%idAln lengthE-value
MIA_01764_146.24%3465e-96MIA_01764_1
A0A0J9XE44_GEOCN42.53%3487e-82Uncharacterized protein OS=Geotrichum candidum GN=BN980_GECA12s00219g PE=4 SV=1
UniRef50_A0A0J9XE4442.53%3481e-78Uncharacterized protein n=1 Tax=Geotrichum candidum TaxID=1173061 RepID=A0A0J9XE44_GEOCN
A0A060T901_BLAAD34.69%3432e-55ARAD1D11594p OS=Blastobotrys adeninivorans GN=GNLVRS02_ARAD1D11594g PE=4 SV=1
Q6C6S7_YARLI29.91%3411e-45YALI0E06633p OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=YALI0_E06633g PE=4 SV=1
A0A1E4TIF2_9ASCO26.34%2051e-12Uncharacterized protein OS=Tortispora caseinolytica NRRL Y-17796 GN=CANCADRAFT_79 PE=4 SV=1

Mitochondrial localization by mitoprotII

Probability of mitochondrial location: 0.1487
Predicted cleavage: 14

Protein family membership

None predicted.

Domains and repeats

  1. Domain
  2. Repeat
1 50 100 150 200 250 300 355

Detailed signature matches

  1. Domain IPR015943
    WD40/YVTN repeat-like-containing domain
    1. G3DSA:2.130.1...
  2. Domain IPR017986
    WD40-repeat-containing domain
    1. SSF50978 (WD40 repe...)
    2. PS50294 (WD_REPEATS...)
  3. Repeat IPR001680
    WD40 repeat
    1. PS50082 (WD_REPEATS_2)
    2. SM00320 (WD40_4)
  4. SITE IPR019775
    WD40 repeat, conserved site
    1. PS00678 (WD_REPEATS_1)

Protein sequence

>MCA_01472_1
MTAESKNILVSRIPPQFQNDSNSKVVEFTLPVSVYCLAWSDNHLAYGHDDGFTVLSQSPDLTASSPFQAEWTFTPHEYRL
DQPVELFCFNQSVVAAVHPTNDISLVSLTSGNSKKLSSPEGHTSYINSVDISTDGLVVSTGDDHKLIVWELEQSNENQTQ
NEYTPKVFNLGGVGKSVRFWRNSNADWVVVLEAGNKVKILDWRKSKWMTTIYIGQSGCCGPLTGSVKDIFIVDDFLYAIG
LGWWKKFDLTALDGGTGITFPKSEGHFYKNPNSSSSSLPVIPNYTEDSHVMGLVTRDAQYIHDILKNSSESTFKLDYKLP
TNEISAAAVRSKGDVLAVVNDKILTLIGNSFKEEE

GO term prediction

Biological Process

None predicted.

Molecular Function

GO:0005515 protein binding

Cellular Component

None predicted.