MCA_01445_1

Browser: contigA:4474063-4474453+

RNA-seq: read pairs 26, FPKM 2.5, percentile rank 12.8% (100% = highest expression)

Protein alignments

Mitochondrial localization by mitoprotII

Probability of mitochondrial location: 0.0056

Protein family membership

None predicted.

Domains and repeats

Detailed signature matches

no IPR

Unintegrated signatures

1. NON_CYTOPLASM... (N...)
   25 - 129

   PHOBIUS
   NON_CYTOPLASMIC_DOMAIN (Non cytoplasmic domain)
2. SIGNAL_PEPTIDE (Sig...)
   1 - 24

   PHOBIUS
   SIGNAL_PEPTIDE (Signal Peptide)
3. SIGNAL_PEPTID... (S...)
   20 - 24

   PHOBIUS
   SIGNAL_PEPTIDE_C_REGION (Signal peptide C-region)
4. SIGNAL_PEPTID... (S...)
   8 - 19

   PHOBIUS
   SIGNAL_PEPTIDE_H_REGION (Signal peptide H-region)
5. SIGNAL_PEPTID... (S...)
   1 - 7

   PHOBIUS
   SIGNAL_PEPTIDE_N_REGION (Signal peptide N-region)
6. SignalP-noTM
   1 - 24

   SignalP euk
   SignalP-noTM (SignalP-noTM)
7. TMhelix
   7 - 24

   TMHMM
   TMhelix (TMhelix)

Protein sequence

>MCA_01445_1
MAQHKSIIFLVVFLASMLFEFVNASPDDYLPPPRLIGETYKDTKLEGPKKIPRGVDQTIYQTQTRTIFQTQTLSTYWISC
VQGTLPSTHVIKGTTLPKKTVTEDGVVTIYGPRSVKGRTVVHPPCATKP

GO term prediction