MCA_01443_1

Browser: contigA:4469872-4470784-

RNA-seq: read pairs 4, FPKM 0.2, percentile rank 4.5% (100% = highest expression)

Protein alignments

Mitochondrial localization by mitoprotII

Probability of mitochondrial location: 0.0631

Protein family membership

None predicted.

Domains and repeats

Detailed signature matches

no IPR

Unintegrated signatures

1. Coil
   224 - 244

   COILS
   Coil (Coil)
2. NON_CYTOPLASM... (N...)
   23 - 284

   PHOBIUS
   NON_CYTOPLASMIC_DOMAIN (Non cytoplasmic domain)
3. SIGNAL_PEPTIDE (Sig...)
   1 - 22

   PHOBIUS
   SIGNAL_PEPTIDE (Signal Peptide)
4. SIGNAL_PEPTID... (S...)
   19 - 22

   PHOBIUS
   SIGNAL_PEPTIDE_C_REGION (Signal peptide C-region)
5. SIGNAL_PEPTID... (S...)
   7 - 18

   PHOBIUS
   SIGNAL_PEPTIDE_H_REGION (Signal peptide H-region)
6. SIGNAL_PEPTID... (S...)
   1 - 6

   PHOBIUS
   SIGNAL_PEPTIDE_N_REGION (Signal peptide N-region)
7. SignalP-noTM
   1 - 22

   SignalP euk
   SignalP-noTM (SignalP-noTM)
8. TMhelix
   7 - 29

   TMHMM
   TMhelix (TMhelix)

Protein sequence

>MCA_01443_1
MVNNQKILFFAAFLAPSLFVSAATLSFSSAPVSVDNEPLPTVYAETEEDPANLLARDSVEVPDDDIHKREPNAKKLRTVT
RKQSTTSSITCVNAEKPKTTVIKGTTLRQKIVTGKDGIVTKYPKRVYKNKKVVLKTCEKKVNEVTPDPTVQSDAPCGTPV
CLEYDVNKAFYMGEWIVYNFCTKFGDFECPDNSHQKREEDVSFPSVTVATTILSNIDDSVKSALAKENDAKEVINKKLES
LKDSSPDGETIKIMDPSEIDFSKLESVEVVDKVAILEGDHVKSA

GO term prediction