Protein
MCA_01438_1
Length
961 amino acids
Browser: contigA:4450114-4453000+
RNA-seq: read pairs 1826, FPKM 23.5, percentile rank 45.8% (100% = highest expression)
Protein function
| EGGNOG: | 0PG74 | FG00643.1 | PAB1 binding protein |
|---|---|---|---|
| SGD closest match: | S000003410 | PBP1 | PAB1-binding protein 1 |
| CGD closest match: | CAL0000181297 | orf19.5459 | Uncharacterized protein |
Protein alignments
| %id | Aln length | E-value | ||
|---|---|---|---|---|
| MIA_02799_1 | 44.67% | 1003 | 0.0 | MIA_02799_1 |
| A0A0J9XHH4_GEOCN | 38.39% | 883 | 4e-135 | Similar to Saccharomyces cerevisiae YGR178C PBP1 Component of glucose deprivation induced stress granules OS=Geotrichum candidum GN=BN980_GECA15s00571g PE=4 SV=1 |
| UniRef50_A0A0J9XHH4 | 38.39% | 883 | 7e-132 | Similar to Saccharomyces cerevisiae YGR178C PBP1 Component of glucose deprivation induced stress granules n=1 Tax=Geotrichum candidum TaxID=1173061 RepID=A0A0J9XHH4_GEOCN |
| A0A161HF97_9ASCO | 32.59% | 982 | 5e-96 | Pbp1p OS=Sugiyamaella lignohabitans GN=PBP1 PE=4 SV=1 |
| A0A060T110_BLAAD | 50.00% | 302 | 7e-69 | ARAD1C16852p OS=Blastobotrys adeninivorans GN=GNLVRS02_ARAD1C16852g PE=4 SV=1 |
| A0A1E3PPT5_9ASCO | 48.21% | 251 | 4e-51 | Uncharacterized protein OS=Nadsonia fulvescens var. elongata DSM 6958 GN=NADFUDRAFT_40602 PE=4 SV=1 |
| Q6CDK5_YARLI | 40.85% | 284 | 7e-42 | YALI0B23232p OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=YALI0_B23232g PE=4 SV=1 |
| PBP1_YEAST | 36.55% | 290 | 3e-37 | PAB1-binding protein 1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=PBP1 PE=1 SV=1 |
| Q5A7K7_CANAL | 42.41% | 224 | 2e-34 | Uncharacterized protein OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=orf19.5459 PE=4 SV=1 |
| A0A1E4TDF4_9ASCO | 38.57% | 280 | 1e-33 | Uncharacterized protein OS=Tortispora caseinolytica NRRL Y-17796 GN=CANCADRAFT_58627 PE=4 SV=1 |
Mitochondrial localization by mitoprotII
Probability of mitochondrial location: 0.5783
Predicted cleavage: 31
Protein family membership
None predicted.
Domains and repeats
-
Domain
1
100
200
300
400
500
600
700
800
900
961
Detailed signature matches
-
-
PF14438 (SM-ATX)
-
no IPR
Unintegrated signatures
-
mobidb-lite (disord...)
Protein sequence
>MCA_01438_1 MSSNRNRNSNVRGNNTNSTSSNLGSSNRRTSTSTNSVENKQQKGSHGSHIPSNPPARNAWGMNSIHAAATGSPSLKTGSL RNSNTSTTNSSSTPVSGAAILDAQKHMYDRILFLLVKSIGSNAIATVSSGASYKGILVAATAEQEIGIVLALAEKIASAP GEENEDGSEPEKYERLVIMPKDLVDLQIISPNLSPEKTTAPSATATSSSKFKTDTDISGRDSIKERDLEKWQDDSAASIP SGLSLEEVSSDQPWDQFAANEQKFGVQSTYDEHYYTTAINRNAPDFEERERRALRLASEIENSSYGGNIHIAEERGLVID DSGMDEEDKYSGVQRLPTQQQQFQRQQRKQSNSSVPPARNSNAYIPPSSRAPANKPDTKGPPNDPAIVLSRLVQPSKDAD SVSSPHLHTDFSHSVGKSTSISALFGAVNQTENNKPTNDTSKDSASRTTNTTSAAATSTEGKKQTNAPPASKAPLPPSVA LPAARAGKLSVDRETPSTDVAKDLVGNFKEFVSTEMEKVQQKKHYLHLKEKSDKIHDFKKFSQEFTINAKVPIDLVPILG KRHTQKATPATEESKPLSPAKSAATTTPASTESSANNSQSNLTLSSAISEAHKKNKVPEMPSPLPATKTPQLPQPKSSQA SPVKSPSISNNSVKGSPAPTPKLNLNFKAPEFKPNPAAHSFTPSYGSSPSPIHPSAHSSPFISHSSPAAAGHTPRQRNGN LFFGSKPLTTKSMAGKFNMFARLAKEQDKNDDKVESVVIERAFLTLPTWTSSVDSSYKDLIPSQDAIASRPFYGRTPIVP SAVIPPNALGIPSGMMPVMQDPRAMMGSSPPVPSQGGFMAYPQYPGGGALGPVPQYGGPQFFGRPPHQPFPMPNMMAQGY VGFQPQEYHQSHQSPRGPHAVPQMGGQPYGGPQVPFYSPQQQHQFLRSPGPHNHHVNHHSNNHHGGHNNRHRGGQSGGDH E
GO term prediction
Biological Process
None predicted.
Molecular Function
None predicted.
Cellular Component
None predicted.