Protein
MCA_01401_1
Length
312 amino acids
Gene name: MRPS28
Description: 37S ribosomal protein S28, mitochondrial
Browser: contigA:4369488-4370427+
RNA-seq: read pairs 5063, FPKM 199.9, percentile rank 88.0% (100% = highest expression)
Protein function
| Annotation: | MRPS28 | 37S ribosomal protein S28, mitochondrial | |
|---|---|---|---|
| KEGG: | K02956 | RP-S15 | small subunit ribosomal protein S15 |
| EGGNOG: | 0PHBQ | PGUG_05297 | Ribosomal protein |
| SGD closest match: | S000002745 | MRPS28 | 37S ribosomal protein S28, mitochondrial |
| CGD closest match: | CAL0000201890 | CAALFM_CR01370CA | Mitochondrial 37S ribosomal protein MRPS28 |
Protein alignments
| %id | Aln length | E-value | ||
|---|---|---|---|---|
| MIA_02513_1 | 62.02% | 258 | 6e-103 | MIA_02513_1 |
| A0A0J9X818_GEOCN | 63.75% | 251 | 2e-100 | Similar to Saccharomyces cerevisiae YDR337W MRPS28 Mitochondrial ribosomal protein of the small subunit OS=Geotrichum candidum GN=BN980_GECA04s07171g PE=3 SV=1 |
| UniRef50_A0A0J9X818 | 63.75% | 251 | 5e-97 | Similar to Saccharomyces cerevisiae YDR337W MRPS28 Mitochondrial ribosomal protein of the small subunit n=1 Tax=Geotrichum candidum TaxID=1173061 RepID=A0A0J9X818_GEOCN |
| A0A161HMD5_9ASCO | 54.07% | 246 | 1e-79 | Mitochondrial 37S ribosomal protein MRPS28 OS=Sugiyamaella lignohabitans GN=MRPS28 PE=3 SV=1 |
| A0A060TAT8_BLAAD | 50.45% | 222 | 3e-72 | ARAD1D28754p OS=Blastobotrys adeninivorans GN=GNLVRS02_ARAD1D28754g PE=3 SV=1 |
| A0A1E3PSB3_9ASCO | 48.90% | 227 | 5e-66 | Uncharacterized protein OS=Nadsonia fulvescens var. elongata DSM 6958 GN=NADFUDRAFT_44561 PE=3 SV=1 |
| RT28_YEAST | 44.78% | 230 | 3e-59 | 37S ribosomal protein S28, mitochondrial OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=MRPS28 PE=1 SV=1 |
| Q6CAU4_YARLI | 42.73% | 220 | 3e-53 | YALI0C24277p OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=YALI0_C24277g PE=3 SV=1 |
| A0A1D8PRY0_CANAL | 37.56% | 221 | 2e-43 | Mitochondrial 37S ribosomal protein MRPS28 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=CAALFM_CR01370CA PE=4 SV=1 |
| A0A1E4T9F0_9ASCO | 34.17% | 240 | 4e-33 | Uncharacterized protein OS=Tortispora caseinolytica NRRL Y-17796 GN=CANCADRAFT_46269 PE=3 SV=1 |
Mitochondrial localization by mitoprotII
Probability of mitochondrial location: 0.9929
Predicted cleavage: 15
Protein family membership
- Ribosomal protein S15 (IPR000589)
- Ribosomal protein S15, bacterial-type (IPR005290)
Domains and repeats
-
Domain
1
50
100
150
200
250
312
Detailed signature matches
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MF_01343_B (Ribosom...)
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-
-
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SSF47060 (S15/NS1 R...)
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no IPR
Unintegrated signatures
-
-
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mobidb-lite (disord...)
Residue annotation
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16S/18S rRNA bindi...
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S13e-L30e interact...
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25S rRNA binding s...
Protein sequence
>MCA_01401_1 MSLNTSFLIKAGRSVSSNISPLLSTSSIQSTAARSLLSNTGLLASFQQPSSSFHTSSPSNAKVSKYVKSMRRIQKHYARE LRKPKPEDVDPVLGRPTVPFLERLKAVVADPANMSFGLTKEEVEKLMFGAEYAKVLNADPSSSQPALLPEVEAQRREAIN RILTARNADIEQNKKLAIKMAVEEFARFEGDTGSSEVQAAISTVKIHYLAAHMKDRKQDLRSMRKLQQLVHNRQGILKYL RNSFPERYYWTIEKLGLNDQAVTQEFALSGRYLEKYQFFGKNTLRVKDSKKERKEKIKKSRMEKKAQKFLRA
GO term prediction
Biological Process
GO:0006412 translation
Molecular Function
GO:0003735 structural constituent of ribosome
Cellular Component
GO:0005622 intracellular
GO:0005840 ribosome