Protein

MCA_01387_1

Length
891 amino acids

Gene name: POP1

Description: Ribonucleases P/MRP protein subunit POP1

Browser: contigA:4334872-4337616-

RNA-seq: read pairs 713, FPKM 9.9, percentile rank 25.8% (100% = highest expression)

Protein function

Annotation:POP1Ribonucleases P/MRP protein subunit POP1
KEGG:K01164POP1 ribonuclease P/MRP protein subunit POP1 [EC:3.1.26.5]
EGGNOG:0PHWGPGUG_01656ribonuclease P complex subunit Pop1
SGD closest match:S000005165POP1Ribonucleases P/MRP protein subunit POP1
CGD closest match:CAL0000178058CAALFM_CR03200CARibonuclease P/MRP protein subunit

Protein alignments

%idAln lengthE-value
MIA_05410_140.29%9010.0MIA_05410_1
A0A0J9X746_GEOCN44.76%6391e-172Similar to Saccharomyces cerevisiae YNL221C POP1 Subunit of both RNase MRP and nuclear RNase P OS=Geotrichum candidum GN=BN980_GECA04s02452g PE=4 SV=1
UniRef50_A0A0J9X74644.76%6393e-169Similar to Saccharomyces cerevisiae YNL221C POP1 Subunit of both RNase MRP and nuclear RNase P n=1 Tax=Geotrichum candidum TaxID=1173061 RepID=A0A0J9X746_GEOCN
A0A1E3PHH7_9ASCO35.47%9055e-157POPLD-domain-containing protein OS=Nadsonia fulvescens var. elongata DSM 6958 GN=NADFUDRAFT_51461 PE=4 SV=1
A0A167DJK4_9ASCO34.08%7133e-123Pop1p OS=Sugiyamaella lignohabitans GN=POP1 PE=4 SV=1
Q6C480_YARLI36.73%6187e-106YALI0E29007p OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=YALI0_E29007g PE=4 SV=1
A0A060T203_BLAAD34.04%6172e-101ARAD1A03432p OS=Blastobotrys adeninivorans GN=GNLVRS02_ARAD1A03432g PE=4 SV=1
POP1_YEAST31.71%6783e-88Ribonucleases P/MRP protein subunit POP1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=POP1 PE=1 SV=1
A0A1D8PSF2_CANAL28.81%6562e-63Ribonuclease P/MRP protein subunit OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=CAALFM_CR03200CA PE=4 SV=1
A0A1E4TJW6_9ASCO28.10%3314e-27Uncharacterized protein OS=Tortispora caseinolytica NRRL Y-17796 GN=CANCADRAFT_30320 PE=4 SV=1

Mitochondrial localization by mitoprotII

Probability of mitochondrial location: 0.6521
Predicted cleavage: 26

Protein family membership

None predicted.

Domains and repeats

  1. Domain
1 100 200 300 400 500 600 700 800 891

Detailed signature matches

  1. Domain IPR009723
    Ribonuclease P/MRP, subunit POP1
    1. PF06978 (POP1)
  2. Domain IPR012590
    POPLD
    1. PF08170 (POPLD)
Unintegrated signatures no IPR
Unintegrated signatures
  1. Coil
  2. mobidb-lite (disord...)

Protein sequence

>MCA_01387_1
MAPKNDSLKRPASKQNLSAVEKKRLKVRNARTILVQHSDPSIRDGKLHVPNFLEARRYEIKQLERAMINSKTAGKQRAFQ
SLPRELRRRAASHNVKRIPHRLRDRATNEMKDDNKPPIPPKSKKLRGYLRVKQKAISQKLQASKKKLEEEISKETKEKDT
DFSLDKYVAPTAKFNKSAVNALAVAPMGKVKFQHRQLKKTWLPTHVWHAKRAHFEDKWGYRIVTEPSLKCYRATHRTSTQ
SGAIAWDCSYYATFVLVATQEVLKKVLALMTANIFSEKYAEVSGTFNYEKVVEGNRSWEGILFDENGAPLGPTLVVWQKT
SKDSNTHRALLRFHPCITIRVVNLLNSLKKSFEFCYNDFRYLIGSIDIVGPASTQALASVLKIKPSSQEADSVLSKIWNR
LGNVVNIQSLPSNFVVSLDNVADPRLSYPPRYNPDKNPTYDGIEMVTSWPDDIFVSTSKGDTENHGLFNEASINKSYVNQ
PTQKNIDSRRAKLTEVDINREKIPFLESDPTFPVLLIKRQDSDTLTLMMPWGWVMPVWYCLQHHSNVRIGGLKQRNQLNF
ESNRLTFPDDYPGTIPGALNEELEAEKTRLKWARKPKAKRLSYRRVSVHGKGNAKGEIGSPFRCDWKYLWKMHQSGNTDI
ELQDPQDVETLYKDDEKLAKAILTKHKEHTKTTSVAEARKYLLKEGQDSKNETEKEVDGNMQDVDEEVTQQEEISVSKES
QQAGSLKFIDTILLEESSRIPHRYVTYGAYEASTALPQNGNIKPLLITAVRLECIHKGTPEKNARIYKLPSGSKLRDRWL
QLLKRNNPHMVSTDAEGNDLKHGNDPELHVNKEDLIGYVTNGAFNLKSAFGTGVGAIVASHTQDQSQGYCIVRNVGSAIG
RLAIWETIPLI

GO term prediction

Biological Process

GO:0001682 tRNA 5'-leader removal
GO:0006396 RNA processing

Molecular Function

GO:0004526 ribonuclease P activity

Cellular Component

None predicted.