MCA_01352_1

Browser: contigA:4224878-4225757+

RNA-seq: read pairs 38, FPKM 1.6, percentile rank 10.8% (100% = highest expression)

Protein alignments

Mitochondrial localization by mitoprotII

Probability of mitochondrial location: 0.1722

Protein family membership

None predicted.

Domains and repeats

Detailed signature matches

no IPR

Unintegrated signatures

1. CYTOPLASMIC_D... (C...)
   27 - 37

   PHOBIUS
   CYTOPLASMIC_DOMAIN (Cytoplasmic domain)
2. NON_CYTOPLASM... (N...)
   57 - 292

   PHOBIUS
   NON_CYTOPLASMIC_DOMAIN (Non cytoplasmic domain)

   1 - 5

   PHOBIUS
   NON_CYTOPLASMIC_DOMAIN (Non cytoplasmic domain)
3. TMhelix
   5 - 22

   TMHMM
   TMhelix (TMhelix)

   26 - 48

   TMHMM
   TMhelix (TMhelix)
4. TRANSMEMBRANE (Tran...)
   38 - 56

   PHOBIUS
   TRANSMEMBRANE (Transmembrane region)

   6 - 26

   PHOBIUS
   TRANSMEMBRANE (Transmembrane region)

Protein sequence

>MCA_01352_1
MEQTTNYLYFCIFLATMALVAFRRSFIVRALWATVERCYWVFILFVFLRLQIQEYYSNLIHGFRLTKDKRCYYAKDYYIY
DEETNELRLKNDFDFVKYSELKRDYNTAINGKNEIQQLASAKALLQKYISRYPNAGADNHTFTSIKNLDVLQWTKFSQIN
KSSSSKSLVEKEFDYEPLVDKSLSFRNQVCQRMRILVGNNKETVVCCFNSPIPVDYFVNSPEVIILRVMEAKYAMIQASI
IMNWIYRDFSRSLGYSESNKSLKTPVDVIYDIEKHVGRRSSIDIFECYRPCQ

GO term prediction