Protein

MCA_01348_1

Length
372 amino acids


Browser: contigA:4214366-4215485-

RNA-seq: read pairs 7236, FPKM 239.7, percentile rank 90.0% (100% = highest expression)

Protein function

KEGG:K18738HEK heterogeneous nuclear rnp K-like protein
EGGNOG:0PK1NHEK2rna-binding protein
SGD closest match:S000000437PBP2PAB1-binding protein 2
CGD closest match:CAL0000175912orf19.5627Uncharacterized protein

Protein alignments

%idAln lengthE-value
A0A0J9YHN3_GEOCN58.17%3063e-113Similar to Saccharomyces cerevisiae YBR233W PBP2 RNA binding protein with similarity to mammalian heterogeneous nuclear RNP K protein OS=Geotrichum candidum GN=BN980_GECA01s06940g PE=4 SV=1
UniRef50_A0A1E3Q8G358.14%3011e-105Uncharacterized protein n=2 Tax=Saccharomycetales TaxID=4892 RepID=A0A1E3Q8G3_LIPST
A0A060T729_BLAAD53.29%3041e-102ARAD1B19712p OS=Blastobotrys adeninivorans GN=GNLVRS02_ARAD1B19712g PE=4 SV=1
A0A1E3PID2_9ASCO48.67%3008e-89Uncharacterized protein (Fragment) OS=Nadsonia fulvescens var. elongata DSM 6958 GN=NADFUDRAFT_13724 PE=4 SV=1
A0A1E4TLY2_9ASCO48.05%3081e-86Uncharacterized protein OS=Tortispora caseinolytica NRRL Y-17796 GN=CANCADRAFT_49013 PE=4 SV=1
MIA_04489_171.04%1833e-79MIA_04489_1
A0A161HLH2_9ASCO51.60%2501e-76Pbp2p OS=Sugiyamaella lignohabitans GN=PBP2 PE=4 SV=1
Q6CGM2_YARLI37.54%3177e-59YALI0A18161p OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=YALI0_A18161g PE=4 SV=1
A0A1D8PQ55_CANAL34.93%2921e-44Uncharacterized protein OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=orf19.5627 PE=4 SV=1
PBP2_YEAST29.95%1873e-21PAB1-binding protein 2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=PBP2 PE=1 SV=1

Mitochondrial localization by mitoprotII

Probability of mitochondrial location: 0.0417

Protein family membership

None predicted.

Domains and repeats

  1. Domain
1 50 100 150 200 250 300 372

Detailed signature matches

    1. SM00322 (kh_6)
    1. PF00013 (KH_1)
    2. SSF54791 (Eukaryoti...)
Unintegrated signatures no IPR
Unintegrated signatures
  1. PS50084 (KH_TYPE_1)
  2. cd02396 (PCBP_like_KH)
  3. mobidb-lite (disord...)

Residue annotation

  1. nucleic acid bindi...
  2. G-X-X-G motif cd02...
  3. nucleic acid bindi...
  4. G-X-X-G motif cd02...
  5. nucleic acid bindi...
  6. G-X-X-G motif cd02...

Protein sequence

>MCA_01348_1
MSESEQKAQISNTNDSLFESNFSEQPVNPPAQGGFETAPSTASGGSQNSNNNENHQSLSVEELNNTTITLRSLVTSKEAG
VIIGKNGKNVADLREQTGVKAGVSKSVDGIQDRVLTVTGTLAGVAQAYSIAAATLLESPIAHTSTITHTPTPAGLAVIRL
LISHHQMGTIIGRQGSKIKAIQEESKVRMVASKELLHNSTERTVEVQGKPESIKSAIWEIGRCLIEDSDRNTNTIFYVPQ
SRSSFISNNGYQNNRYNNGYHNNNGQNMNRNNFRSNYDDPNKARAVSEEMSISADMVGCIIGRKGSKIAEIRRESGAQIS
IAKEPHDNTGERMFTITGTPEANQKALTLLFNQLEFEKKRRTEANEAEKIDA

GO term prediction

Biological Process

None predicted.

Molecular Function

GO:0003676 nucleic acid binding
GO:0003723 RNA binding

Cellular Component

None predicted.