Protein
MCA_01348_1
Length
372 amino acids
Browser: contigA:4214366-4215485-
RNA-seq: read pairs 7236, FPKM 239.7, percentile rank 90.0% (100% = highest expression)
Protein function
| KEGG: | K18738 | HEK | heterogeneous nuclear rnp K-like protein |
|---|---|---|---|
| EGGNOG: | 0PK1N | HEK2 | rna-binding protein |
| SGD closest match: | S000000437 | PBP2 | PAB1-binding protein 2 |
| CGD closest match: | CAL0000175912 | orf19.5627 | Uncharacterized protein |
Protein alignments
| %id | Aln length | E-value | ||
|---|---|---|---|---|
| A0A0J9YHN3_GEOCN | 58.17% | 306 | 3e-113 | Similar to Saccharomyces cerevisiae YBR233W PBP2 RNA binding protein with similarity to mammalian heterogeneous nuclear RNP K protein OS=Geotrichum candidum GN=BN980_GECA01s06940g PE=4 SV=1 |
| UniRef50_A0A1E3Q8G3 | 58.14% | 301 | 1e-105 | Uncharacterized protein n=2 Tax=Saccharomycetales TaxID=4892 RepID=A0A1E3Q8G3_LIPST |
| A0A060T729_BLAAD | 53.29% | 304 | 1e-102 | ARAD1B19712p OS=Blastobotrys adeninivorans GN=GNLVRS02_ARAD1B19712g PE=4 SV=1 |
| A0A1E3PID2_9ASCO | 48.67% | 300 | 8e-89 | Uncharacterized protein (Fragment) OS=Nadsonia fulvescens var. elongata DSM 6958 GN=NADFUDRAFT_13724 PE=4 SV=1 |
| A0A1E4TLY2_9ASCO | 48.05% | 308 | 1e-86 | Uncharacterized protein OS=Tortispora caseinolytica NRRL Y-17796 GN=CANCADRAFT_49013 PE=4 SV=1 |
| MIA_04489_1 | 71.04% | 183 | 3e-79 | MIA_04489_1 |
| A0A161HLH2_9ASCO | 51.60% | 250 | 1e-76 | Pbp2p OS=Sugiyamaella lignohabitans GN=PBP2 PE=4 SV=1 |
| Q6CGM2_YARLI | 37.54% | 317 | 7e-59 | YALI0A18161p OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=YALI0_A18161g PE=4 SV=1 |
| A0A1D8PQ55_CANAL | 34.93% | 292 | 1e-44 | Uncharacterized protein OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=orf19.5627 PE=4 SV=1 |
| PBP2_YEAST | 29.95% | 187 | 3e-21 | PAB1-binding protein 2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=PBP2 PE=1 SV=1 |
Mitochondrial localization by mitoprotII
Probability of mitochondrial location: 0.0417
Protein family membership
None predicted.
Domains and repeats
-
Domain
1
50
100
150
200
250
300
372
Detailed signature matches
no IPR
Unintegrated signatures
-
PS50084 (KH_TYPE_1)
-
cd02396 (PCBP_like_KH)
-
mobidb-lite (disord...)
Residue annotation
-
nucleic acid bindi...
-
G-X-X-G motif cd02...
-
nucleic acid bindi...
-
G-X-X-G motif cd02...
-
nucleic acid bindi...
-
G-X-X-G motif cd02...
Protein sequence
>MCA_01348_1 MSESEQKAQISNTNDSLFESNFSEQPVNPPAQGGFETAPSTASGGSQNSNNNENHQSLSVEELNNTTITLRSLVTSKEAG VIIGKNGKNVADLREQTGVKAGVSKSVDGIQDRVLTVTGTLAGVAQAYSIAAATLLESPIAHTSTITHTPTPAGLAVIRL LISHHQMGTIIGRQGSKIKAIQEESKVRMVASKELLHNSTERTVEVQGKPESIKSAIWEIGRCLIEDSDRNTNTIFYVPQ SRSSFISNNGYQNNRYNNGYHNNNGQNMNRNNFRSNYDDPNKARAVSEEMSISADMVGCIIGRKGSKIAEIRRESGAQIS IAKEPHDNTGERMFTITGTPEANQKALTLLFNQLEFEKKRRTEANEAEKIDA
GO term prediction
Biological Process
None predicted.
Molecular Function
GO:0003676 nucleic acid binding
GO:0003723 RNA binding
Cellular Component
None predicted.