Protein
MCA_01344_1
Length
719 amino acids
Gene name: VPS52
Description: Vacuolar protein sorting-associated protein 52
Browser: contigA:4203060-4205283+
RNA-seq: read pairs 1846, FPKM 31.7, percentile rank 54.2% (100% = highest expression)
Protein function
| Annotation: | VPS52 | Vacuolar protein sorting-associated protein 52 | |
|---|---|---|---|
| KEGG: | K20298 | VPS52 | vacuolar protein sorting-associated protein 52 |
| EGGNOG: | 0PHT9 | PGUG_01102 | Vps52 Sac2 family protein |
| SGD closest match: | S000002892 | VPS52 | Vacuolar protein sorting-associated protein 52 |
| CGD closest match: | CAL0000188207 | VPS52 | Vps52p |
Protein alignments
| %id | Aln length | E-value | ||
|---|---|---|---|---|
| MIA_01189_1 | 64.33% | 586 | 0.0 | MIA_01189_1 |
| A0A0J9X3K9_GEOCN | 53.89% | 642 | 0.0 | Similar to Saccharomyces cerevisiae YDR484W VPS52 Component of the GARP (Golgi-associated retrograde protein) complex OS=Geotrichum candidum GN=BN980_GECA01s04157g PE=4 SV=1 |
| UniRef50_A0A0J9X3K9 | 53.89% | 642 | 0.0 | Similar to Saccharomyces cerevisiae YDR484W VPS52 Component of the GARP (Golgi-associated retrograde protein) complex n=1 Tax=Geotrichum candidum TaxID=1173061 RepID=A0A0J9X3K9_GEOCN |
| A0A167DI58_9ASCO | 45.50% | 567 | 3e-160 | Vps52p OS=Sugiyamaella lignohabitans GN=VPS52 PE=4 SV=1 |
| A0A060TEX6_BLAAD | 44.39% | 588 | 3e-154 | ARAD1D17820p OS=Blastobotrys adeninivorans GN=GNLVRS02_ARAD1D17820g PE=4 SV=1 |
| A0A1E3PPJ5_9ASCO | 45.28% | 519 | 3e-148 | Vps52/Sac2 (Fragment) OS=Nadsonia fulvescens var. elongata DSM 6958 GN=NADFUDRAFT_82539 PE=4 SV=1 |
| A0A1E4TD79_9ASCO | 39.01% | 546 | 9e-116 | Uncharacterized protein OS=Tortispora caseinolytica NRRL Y-17796 GN=CANCADRAFT_142717 PE=4 SV=1 |
| Q6C2J4_YARLI | 39.86% | 439 | 3e-84 | YALI0F07381p OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=YALI0_F07381g PE=4 SV=1 |
| A0A1D8PUA9_CANAL | 31.05% | 570 | 1e-75 | Vps52p OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=VPS52 PE=4 SV=1 |
| VPS52_YEAST | 30.54% | 560 | 1e-70 | Vacuolar protein sorting-associated protein 52 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=VPS52 PE=1 SV=2 |
Mitochondrial localization by mitoprotII
Probability of mitochondrial location: 0.1250
Protein family membership
- Vps52 (IPR007258)
Domains and repeats
None predicted.
Detailed signature matches
no IPR
Unintegrated signatures
-
-
mobidb-lite (disord...)
Protein sequence
>MCA_01344_1 MSIANLRTNLRENNSRSSFPRLSTDLFRSSTPNLNSSVSSLALDSVSRAGTPENLKPPANRISRRSISRHPPSGTAESAV DVLTILDTILKTSDLEDDLNDEDTTISEKPPSECDDEDDDLSFLDSILESRSPSDTYSPPFISLKDLEDTNSPQEITLEH NEYDDEIILRNYQEKLNQFDDIRSQIQHSDTILGDIETYLTSFQKDLNTLSAEMESLETRSRALNRKLIIRQNAEQKLAP VVEALIIPPMIVQQISDGEISMQWLAALKYINQRQNELAIMLKERQEFKAIKAAEQQLQIVSRKALERIRNFMASRIKSF RNFGVNSQIVQKELLDYRDLYSYLKTQCPELAEDILQAYINTMAWYYMSYFQRYIKALEKMNIHKVERNVLLGSDEGGKR GLIFSRSSAKEKTSMQVIMDSMNLGNRGNIITSDDPSVILAQIAETSANAPTIYHMETGFRSLNLALLDNVTIEYQFLQD FFQLKPGDQVNKVFDTIFEKTFALGQEYTKFLTQDSFDSYGILICIRLCRKLEFESQHRRIPVMGNYLNLQLINLWPRFQ SVMDAHCESLHRASSRSTLHSFVAETTGAAGTGGIGSSAAALVPHPLTQAFSSFVAGILALCENEDSTSEPVARSLVRLR NEFESVLTKLSAAAFGSESSNSKSAGSKREKFLYNNYFLVSTILSDLTGPLADQENEHFKMLTEAYEPESERKKKENVK
GO term prediction
Biological Process
None predicted.
Molecular Function
None predicted.
Cellular Component
None predicted.