Protein

MCA_01314_1

Length
1,265 amino acids

Description: protein with Zn(2)C6 fungal-type DNA-bnding domain

Browser: contigA:4119973-4123882-

RNA-seq: read pairs 13585, FPKM 132.6, percentile rank 83.3% (100% = highest expression)

Protein function

Annotation:protein with Zn(2)C6 fungal-type DNA-bnding domain

Protein alignments

%idAln lengthE-value
MIA_04673_153.33%4951e-160MIA_04673_1
A0A0J9XIV5_GEOCN45.47%4756e-130Uncharacterized protein OS=Geotrichum candidum GN=BN980_GECA19s02122g PE=4 SV=1
UniRef50_A0A0J9XIV545.47%4751e-126Uncharacterized protein n=1 Tax=Geotrichum candidum TaxID=1173061 RepID=A0A0J9XIV5_GEOCN
A0A1E4T9L1_9ASCO26.75%4713e-40Uncharacterized protein OS=Tortispora caseinolytica NRRL Y-17796 GN=CANCADRAFT_4607 PE=4 SV=1

Mitochondrial localization by mitoprotII

Probability of mitochondrial location: 0.5127
Predicted cleavage: 17

Protein family membership

Domains and repeats

  1. Domain
1 200 400 600 800 1000 1265

Detailed signature matches

  1. Family IPR021858
    Fungal transcription factor
    1. PF11951 (Fungal_tra...)
  2. Domain IPR001138
    Zn(2)-C6 fungal-type DNA-binding domain
    1. PF00172 (Zn_clus)
    2. G3DSA:4.10.24...
    3. PS00463 (ZN2_CY6_FU...)
    4. SM00066 (gal4_2)
    5. SSF57701 (Zn2/Cys6 ...)
    6. PS50048 (ZN2_CY6_FU...)
    7. cd00067 (GAL4)
Unintegrated signatures no IPR
Unintegrated signatures
  1. CYTOPLASMIC_D... (C...)
  2. NON_CYTOPLASM... (N...)
  3. TRANSMEMBRANE (Tran...)
  4. mobidb-lite (disord...)

Residue annotation

  1. DNA binding site c...
  2. Zn2+ binding site ...

Protein sequence

>MCA_01314_1
MTSSIFPPGAEKAVRLRGSCIQCRKRKRKCDKLRPSCTLCLHSHSECQYDTFQAYDSSAPHKRRRKRKQNDDSTKQESDS
PSQDSRKAQEDEANKDERSRKQPQSLPSSSGTSGDTRNLTFSNNNAATLNQQQPQQPPQQQQQQQQQNQPFRNFTFQITT
LDDKSPWQAAPQVQQQQQQQPIATTSSSHQNVQQKQQQPPSSSYTASQNAPILPPVSNMSSSSSMATQQQQDLYQNSQQI
NALPVLQFPQNQQQSQTSNNNFNSTSTGYQYNAQPSSTFNNTNAPFYSPTPTSSTTYLPPINTTSNAPSQQHPQYPVVSS
SSSSPSSSKSFSNYNDSNSLPFPSTSHSPSFQQPLRSLSQDYGHVKSSAEQGASPRTQYNNNPTNFNYYEPPTSSAASSP
TLSVAGLLSNDSDPHPYNNTNNETKQGGSLPNYNSNNNATTPSFPNNRRSFSSLSSIINPPIESSFSSSNPPPATTIGGG
VSRTPISISQKQQQHATQMSFISLLNMSNPTATINHNNDSTNIPNINARITALDENGNPVNNTANNNNGYNNNNNNNSGN
SLLQYSLNNRSGSVSSVSSFSSDSSTSSIGVRNLLNYPTVQTTGTIQPVNDNNNNEDENQKNGIKNNSQYINNNNNQNTQ
SNNGIISSSSTTALVRDNNQFNDNFSLESLLGIQTSGGSLVTRAASPSFPMESYLDVRIPKSLRYLWAFYIESTSRFCAI
HDFETPFRSSIIPMAANNEALQQSLMQLSGVYRNKILGYRDSNYDRTMIKLNVKSIHGLRNQLVVASVSQADALIGIATC
LSLTCCAIGENNPVQYNVHLYGALMLVTQVLIPNDRFNLNISFDAWFLFKWTTYTLVLMNLNIIGSAKYLYKEAKGHDLK
SMQALYQWWREHDSDDPEYELPVDSFYGFGTLLAPLILQFNILVYRKTMTDEYLRLKRKRRARAAAALSPNATTTTNNHE
EEKEEAEFINWFEKQDIQRVRQFEIDDLERKLWTVYDNSTFSKHTSVTSKQTEIDLLHCDNAFHSAALIWLYTYLKPGYD
EDEEAIQESLAQEDDRQDIEENRATMQEISQRELDRQADRTLRQQHSDSWVSIQTVRIPSLISSIVEEVKAISPSSRTAA
ALLFVIYIVGSYAEGDDRQFFVSHLSNMKTTCLSSVASVLEAFDVIWKMRDQSKKQRVVHVKKNSRIARNQMLGQSPFSP
SMFNNTRITEVEEGQQQDEAAAGGINQSPNNDNGEEYIEKVIEVPCDMVKCHNRVKELGINVCLY

GO term prediction

Biological Process

GO:0006355 regulation of transcription, DNA-templated

Molecular Function

GO:0000981 RNA polymerase II transcription factor activity, sequence-specific DNA binding
GO:0008270 zinc ion binding

Cellular Component

GO:0005634 nucleus