MCA_01310_1

Browser: contigA:4107181-4107784-

RNA-seq: read pairs 122, FPKM 7.5, percentile rank 21.4% (100% = highest expression)

Protein alignments

Mitochondrial localization by mitoprotII

Probability of mitochondrial location: 0.0538

Protein family membership

None predicted.

Domains and repeats

Detailed signature matches

no IPR

Unintegrated signatures

1. NON_CYTOPLASM... (N...)
   25 - 200

   PHOBIUS
   NON_CYTOPLASMIC_DOMAIN (Non cytoplasmic domain)
2. SIGNAL_PEPTIDE (Sig...)
   1 - 24

   PHOBIUS
   SIGNAL_PEPTIDE (Signal Peptide)
3. SIGNAL_PEPTID... (S...)
   18 - 24

   PHOBIUS
   SIGNAL_PEPTIDE_C_REGION (Signal peptide C-region)
4. SIGNAL_PEPTID... (S...)
   6 - 17

   PHOBIUS
   SIGNAL_PEPTIDE_H_REGION (Signal peptide H-region)
5. SIGNAL_PEPTID... (S...)
   1 - 5

   PHOBIUS
   SIGNAL_PEPTIDE_N_REGION (Signal peptide N-region)
6. SignalP-noTM
   1 - 24

   SignalP euk
   SignalP-noTM (SignalP-noTM)

Protein sequence

>MCA_01310_1
MKPQNVLYALFFASVALGIPVAEAEAEALAEAAPEAIAEPIAEAVPEAAPEALADPDADPTFWSHSKYWKKGTKFGMYGC
NKKWQKKSIYVCPDGRLTYGFIYPGSVKFHGSFYNGNLYGNSVGNGYYGVGCNAFNYFVVGKYQTILNFKYAWSNHWKSK
IIKSNSKFWCDDNGYICKEKPKSCNSCQEIEFQCNENESF

GO term prediction