Protein
MCA_01289_1
Length
730 amino acids
Browser: contigA:4050264-4052457-
RNA-seq: read pairs 2391, FPKM 40.4, percentile rank 60.5% (100% = highest expression)
Protein function
| EGGNOG: | 0PJAD | FG01183.1 | Nuclear localization protein |
|---|---|---|---|
| SGD closest match: | S000004697 | NPL6 | Chromatin structure-remodeling complex subunit RSC7 |
| CGD closest match: | CAL0000183327 | NPL6 | Npl6p |
Protein alignments
| %id | Aln length | E-value | ||
|---|---|---|---|---|
| A0A0J9XBI9_GEOCN | 52.51% | 358 | 3e-98 | Similar to Saccharomyces cerevisiae YMR091C NPL6 Component of the RSC chromatin remodeling complex OS=Geotrichum candidum GN=BN980_GECA08s01132g PE=4 SV=1 |
| UniRef50_A0A0J9XBI9 | 52.51% | 358 | 7e-95 | Similar to Saccharomyces cerevisiae YMR091C NPL6 Component of the RSC chromatin remodeling complex n=1 Tax=Geotrichum candidum TaxID=1173061 RepID=A0A0J9XBI9_GEOCN |
| MIA_01874_1 | 43.32% | 397 | 4e-80 | MIA_01874_1 |
| A0A167C8G6_9ASCO | 65.81% | 155 | 3e-62 | Npl6p OS=Sugiyamaella lignohabitans GN=NPL6 PE=4 SV=1 |
| A0A060SWZ9_BLAAD | 61.99% | 171 | 2e-61 | ARAD1A00814p OS=Blastobotrys adeninivorans GN=GNLVRS02_ARAD1A00814g PE=4 SV=1 |
| Q6C6T9_YARLI | 66.67% | 150 | 1e-60 | YALI0E06369p OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=YALI0_E06369g PE=4 SV=1 |
| A0A1E3PEL3_9ASCO | 60.69% | 145 | 7e-52 | Uncharacterized protein OS=Nadsonia fulvescens var. elongata DSM 6958 GN=NADFUDRAFT_80000 PE=4 SV=1 |
| A0A1E4TLH4_9ASCO | 48.92% | 139 | 1e-37 | Uncharacterized protein (Fragment) OS=Tortispora caseinolytica NRRL Y-17796 GN=CANCADRAFT_19205 PE=4 SV=1 |
| A0A1D8PG62_CANAL | 46.27% | 134 | 2e-34 | Npl6p OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=NPL6 PE=4 SV=1 |
| RSC7_YEAST | 51.20% | 125 | 2e-33 | Chromatin structure-remodeling complex subunit RSC7 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=NPL6 PE=1 SV=1 |
Mitochondrial localization by mitoprotII
Probability of mitochondrial location: 0.0030
Protein family membership
Domains and repeats
None predicted.
Detailed signature matches
no IPR
Unintegrated signatures
-
-
mobidb-lite (disord...)
Protein sequence
>MCA_01289_1 MSSHTDVTTSQELGPENDEYLPLLIDEAGEQKANQDGELQGGREYRIHTFTLPGRGKKLFMMATECAKELNYRDSYLLFN KNKSLYKMIASQSDKEKLIKMGLLQYSFRSRQIALVTARSIFRAFGAKVIKNGYRVKDDYWEQKAIEAGYTDKDRVIIEN KKFGIANASTQNAAHHLNKGLGAHHGPGSSAGPGTHPQIPAPLGYNYNETLEIFTKNPATAAKDSFLPGSDITGSFEFQD HAGFSAILAANNKELSEALATPSSVGRASSKALTNKLALYVDSVERAQVVETYHATLNFGRYLNQQRAIRNKLWDVFWKP KSLVQLEYDQKKLEDNRKRRKIYNEEVAEREKKLAERALALEKKKKQQEQLASGNPLNSADDDKDIPSALMDDENDMKQF LNTDGLDDDILGNSMLKLDSDTSNTEKKDSSDDITNKKDDSIEEIKLEDIPMPKEPSPEPQIHSYLDDGVYEERVPKTVP PGFIKYTAGELERAPPAKVLMPDPELAVQPFVPPQRRPLVSNRNKPAPPPVDPSQQAPPSQPPVPTPGQGPVAGAQPFFP GKAPQNIPNVKVVPQMQTTPRRRASRGRARRNEPVQPHIQSPSFYGAQQNPQVVQQQQQQQPPPSQMPSVPNHHIPVQQQ RQPPPPQTISQQQQQQQQQQQQPPPQPHAPQQPPLFPGGLTPQQIQALQYLKQLQQTNQPIPPQLRAQLHQIQIQAQQAQ QAQQQQQQHQ
GO term prediction
Biological Process
None predicted.
Molecular Function
None predicted.
Cellular Component
None predicted.