Protein
MCA_01276_1
Length
1,450 amino acids
Description: pentatricopeptide repeat protein; probably localized in mitochondria
Browser: contigA:4015457-4019810-
RNA-seq: read pairs 262, FPKM 2.2, percentile rank 12.2% (100% = highest expression)
Protein function
Annotation: | pentatricopeptide repeat protein; probably localized in mitochondria | ||
---|---|---|---|
EGGNOG: | 0PH31 | pentatricopeptide repeat protein |
Protein alignments
%id | Aln length | E-value | ||
---|---|---|---|---|
MIA_06160_1 | 44.77% | 1032 | 0.0 | MIA_06160_1 |
A0A0J9X4K7_GEOCN | 35.61% | 1112 | 0.0 | Uncharacterized protein OS=Geotrichum candidum GN=BN980_GECA02s05928g PE=4 SV=1 |
UniRef50_A0A0J9X4K7 | 35.61% | 1112 | 0.0 | Uncharacterized protein n=1 Tax=Geotrichum candidum TaxID=1173061 RepID=A0A0J9X4K7_GEOCN |
A0A161HMC1_9ASCO | 36.84% | 1121 | 0.0 | Uncharacterized protein OS=Sugiyamaella lignohabitans GN=AWJ20_2418 PE=4 SV=1 |
A0A060TA03_BLAAD | 34.18% | 1106 | 0.0 | ARAD1D15708p OS=Blastobotrys adeninivorans GN=GNLVRS02_ARAD1D15708g PE=4 SV=1 |
A0A1E3PSL4_9ASCO | 33.95% | 1131 | 0.0 | Uncharacterized protein OS=Nadsonia fulvescens var. elongata DSM 6958 GN=NADFUDRAFT_81286 PE=4 SV=1 |
Q6C051_YARLI | 39.30% | 575 | 1e-112 | YALI0F27753p OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=YALI0_F27753g PE=4 SV=1 |
A0A1E4TC61_9ASCO | 25.17% | 449 | 4e-34 | Uncharacterized protein OS=Tortispora caseinolytica NRRL Y-17796 GN=CANCADRAFT_138606 PE=4 SV=1 |
Mitochondrial localization by mitoprotII
Probability of mitochondrial location: 0.9879
Predicted cleavage: 47
Protein family membership
None predicted.
Domains and repeats
-
Domain
-
Repeat
1
200
400
600
800
1000
1200
1450
Detailed signature matches
-
-
PF17177 (PPR_long)
-
no IPR
Unintegrated signatures
-
-
-
NON_CYTOPLASM... (N...)
-
SIGNAL_PEPTIDE (Sig...)
-
SIGNAL_PEPTID... (S...)
-
SIGNAL_PEPTID... (S...)
-
SIGNAL_PEPTID... (S...)
-
mobidb-lite (disord...)
Protein sequence
>MCA_01276_1 MLFKSFSRHSSLAKTIFAASNASGQPAFFMTTSQLKRQQSQLVPRQNSSFGSSRNSNNSTNPKAYACLCNSSSYSTLSPL SSLDDDKRREAILNESIGSSGSCLIYNQQHSLAPSNEVLESNYSTINNIRSFSRPRRCSTSVLDEDFTPLVEYSGQEQLQ RRRYSTSAARFGSRNNTTSNSPTNENSQPQQPQNDSDKSKPSSTSAAQPSQTNNTFYEPSYENGNDPIYESTSTTATKNS NSELNPLTPLNSTSSIASDQFTPNSSSFSEKLSPTISSESSPLLPSLYKNLSNALSSGSFQSVVSSYDLFVKNEIPLDLD STQAVLQVISQNLTQKSVDPVTAAVSTLEIYSHLISRQVTPSLEIYSTVISTLIESSKFINSTVESSFLFKGITSRVHPK LPLLQSIKSELQNCQSSPFVKIALDIYNASTTYHSKKYSPAVYSKLIDACVTYHHEKYLSSIISSYEEHQYTLSPQDYAN LILGYGQYKDASAVIECYNFYKRKAPIFSDKKEMLVYSALVTAFFKLNSPSSALRFLDLLLDSTSSNTSPQSPHLSSIPL YAPKISQTQNDKRLASLAPVVNSIIAGFASIGDYNRCWEWILKVNSNAEFPPIDLSTLITSLTCLCKADQVSLADKLFDL MASRKDSKDSLEFNVARADYLAMCIRTKSFNLFMKAIKESRLRNGIWDTMTIISATRYLIALGEAELATKVFNQQTERYT KYINSNSELCHLISSSNDTVQTDAFSSVTDYMEKYKLLNVANGLNLSKSSFFSKRSFFREKGGQKILQKVWDDVALNNSK ELNAIRETSPYIDSYIVSLHLVWIKACAGENNSLGEISLPYPLLDYLKENFAYFVNSLIQRQAKFPLSINSEFISDISEA LTLLNDSETKWKWQKFTESLSSPTPIPVDISKAAADLGTTSTSNENSLHPNPSVSQLPWRTDITSQITLLAQNPSTLYKA FDQLEQAVALNQMVGPEAYLAIIDSASSKKALTIIQSAYRLALQSLPHPSEHPDAWVAWNMIHRSVIQRANLDYTLAQAA YQHLAEMGSFPCANGYAQLINNAPSSNSHDEASDAIRLFSEARQNGVILNTFIYNVLLSKLSKARHLKEALELFNDMDAT QTKKTNITYGTMISACCRSGEEATALKLFEEMESSPQYTPKIAPFNTLLQYYVHTKQDREKALAVYNKIKTIGLNPSEHT YKLLIECYSAIAPIDIEQADNVLLTIVNDKNQVTTKHYATLIFGRGVSLKNLRAAQDFYNALVNQNRVRPDKHIFQALLE SYTVNENQVHGTTDVLKEMVKYGVDLDACMANTLIRGWAKVNLAKAQGLFDYIMFNAQIAEPSSFESIIRAYLYHGQTDK VFELVQLLKAQYYPEPVVSKIEQLVSRYVSNDGMAIVVDVAERERILLESIFRHDSHALLQSFNGSTSSSQMEIPIPHTS FVQQDNNIQA
GO term prediction
Biological Process
None predicted.
Molecular Function
GO:0005515 protein binding
Cellular Component
None predicted.