Protein
MCA_01236_1
Length
345 amino acids
Gene name: RAD10
Description: DNA repair protein RAD10
Browser: contigA:3885824-3886862+
RNA-seq: read pairs 227, FPKM 8.1, percentile rank 22.6% (100% = highest expression)
Protein function
| Annotation: | RAD10 | DNA repair protein RAD10 | |
|---|---|---|---|
| KEGG: | K10849 | ERCC1 | DNA excision repair protein ERCC-1 |
| EGGNOG: | 0PP98 | RAD10 | mating-type switching protein swi10 |
| SGD closest match: | S000004560 | RAD10 | DNA repair protein RAD10 |
| CGD closest match: | CAL0000193633 | RAD10 | Rad10p |
Protein alignments
| %id | Aln length | E-value | ||
|---|---|---|---|---|
| MIA_01948_1 | 43.79% | 306 | 4e-83 | MIA_01948_1 |
| A0A0J9XFI4_GEOCN | 41.13% | 248 | 3e-54 | Similar to Saccharomyces cerevisiae YML095C RAD10 Single-stranded DNA endonuclease (With Rad1p), cleaves single-stranded DNA during nucleotide excision repair and double-strand break repair OS=Geotrichum candidum GN=BN980_GECA14s01979g PE=4 SV=1 |
| UniRef50_A0A0J9XFI4 | 41.13% | 248 | 7e-51 | Similar to Saccharomyces cerevisiae YML095C RAD10 Single-stranded DNA endonuclease (With Rad1p), cleaves single-stranded DNA during nucleotide excision repair and double-strand break repair n=1 Tax=Geotrichum candidum TaxID=1173061 RepID=A0A0J9XFI4_GEOCN |
| A0A1E3PS58_9ASCO | 37.92% | 269 | 2e-54 | Mating-type switching protein swi10 (Fragment) OS=Nadsonia fulvescens var. elongata DSM 6958 GN=NADFUDRAFT_12115 PE=4 SV=1 |
| A0A161HIK4_9ASCO | 32.59% | 270 | 1e-38 | Rad10p OS=Sugiyamaella lignohabitans GN=RAD10 PE=4 SV=1 |
| A0A060TB30_BLAAD | 35.06% | 251 | 3e-37 | ARAD1D31482p OS=Blastobotrys adeninivorans GN=GNLVRS02_ARAD1D31482g PE=4 SV=1 |
| Q6C7S4_YARLI | 32.67% | 251 | 2e-35 | YALI0D25762p OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=YALI0_D25762g PE=4 SV=1 |
| Q5AA15_CANAL | 31.56% | 282 | 9e-25 | Rad10p OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=RAD10 PE=4 SV=1 |
| RAD10_YEAST | 27.89% | 147 | 5e-14 | DNA repair protein RAD10 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=RAD10 PE=1 SV=1 |
Mitochondrial localization by mitoprotII
Probability of mitochondrial location: 0.4692
Predicted cleavage: 28
Protein family membership
- ERCC1/RAD10/SWI10 family (IPR004579)
Domains and repeats
-
Domain
1
50
100
150
200
250
300
345
Detailed signature matches
no IPR
Unintegrated signatures
-
-
mobidb-lite (disord...)
Protein sequence
>MCA_01236_1 MSEQKSSSSSNILNRLKRPLPRDTLPRQNTPPADPNKVYPRPPPSYNAKASTQLTPITSSSIAVSPRQRGNPVLSHIKSV PWSFSDIAADYLVMASTSVDPNHTSPPFPASATTTNVLFLSLKYHRLHPEYIHMRIGKLGTTSTDPNKSSSVPSPAILRV LLVMIDIEQPDDTLREIYKIAFARDMSVVLAWNFEDAARYLMNFKLMQSQSLDPSLNSFNALTGTSIVTKNNEDKPSGAD LAAMNYEAHLIDVVTKIRGVNKTDAISLISQYGSLSNALINGPKDLESIGGWGSTKVERFKEAVTEPFILIDDEEEEEEE EREAPIEKLSESANLESVVDEIIEM
GO term prediction
Biological Process
GO:0006281 DNA repair
Molecular Function
GO:0003684 damaged DNA binding
GO:0004519 endonuclease activity
Cellular Component
GO:0005634 nucleus