Protein
MCA_01234_1
Length
1,359 amino acids
Gene name: NUP170
Description: Nucleoporin NUP170
Browser: contigA:3879360-3883569+
RNA-seq: read pairs 3703, FPKM 33.6, percentile rank 55.8% (100% = highest expression)
Protein function
| Annotation: | NUP170 | Nucleoporin NUP170 | |
|---|---|---|---|
| KEGG: | K14312 | NUP155 | nuclear pore complex protein Nup155 |
| EGGNOG: | 0PHQ9 | NUP170 | nucleoporin |
| SGD closest match: | S000000175 | NUP170 | Nucleoporin NUP170 |
| CGD closest match: | CAL0000175577 | orf19.2485 | Uncharacterized protein |
Protein alignments
| %id | Aln length | E-value | ||
|---|---|---|---|---|
| MIA_04987_1 | 63.87% | 1337 | 0.0 | MIA_04987_1 |
| A0A0J9XC70_GEOCN | 53.35% | 1329 | 0.0 | Similar to Saccharomyces cerevisiae YBL079W NUP170 Subunit of the nuclear pore complex (NPC) OS=Geotrichum candidum GN=BN980_GECA10s00219g PE=4 SV=1 |
| UniRef50_A0A0J9XC70 | 53.35% | 1329 | 0.0 | Similar to Saccharomyces cerevisiae YBL079W NUP170 Subunit of the nuclear pore complex (NPC) n=1 Tax=Geotrichum candidum TaxID=1173061 RepID=A0A0J9XC70_GEOCN |
| A0A060T3R1_BLAAD | 44.31% | 1363 | 0.0 | ARAD1C41932p OS=Blastobotrys adeninivorans GN=GNLVRS02_ARAD1C41932g PE=4 SV=1 |
| A0A1E3PSY0_9ASCO | 40.99% | 1471 | 0.0 | Nucleoporin-domain-containing protein OS=Nadsonia fulvescens var. elongata DSM 6958 GN=NADFUDRAFT_81124 PE=4 SV=1 |
| A0A167C761_9ASCO | 45.61% | 1265 | 0.0 | Nup170p OS=Sugiyamaella lignohabitans GN=NUP170 PE=4 SV=1 |
| Q6C792_YARLI | 41.76% | 1377 | 0.0 | YALI0E02706p OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=YALI0_E02706g PE=4 SV=1 |
| A0A1E4TE48_9ASCO | 35.90% | 1340 | 0.0 | Uncharacterized protein OS=Tortispora caseinolytica NRRL Y-17796 GN=CANCADRAFT_99845 PE=4 SV=1 |
| NU170_YEAST | 30.39% | 1418 | 0.0 | Nucleoporin NUP170 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=NUP170 PE=1 SV=1 |
| A0A1D8PDK7_CANAL | 30.87% | 1367 | 0.0 | Uncharacterized protein OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=orf19.2485 PE=4 SV=1 |
Mitochondrial localization by mitoprotII
Probability of mitochondrial location: 0.0214
Protein family membership
None predicted.
Domains and repeats
-
Domain
-
Domain
1
200
400
600
800
1000
1200
1359
Detailed signature matches
no IPR
Unintegrated signatures
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CYTOPLASMIC_D... (C...)
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NON_CYTOPLASM... (N...)
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TRANSMEMBRANE (Tran...)
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mobidb-lite (disord...)
Protein sequence
>MCA_01234_1 MMDSRIQPNQAVSRPDPNKIGVPALAQPLSTSAPLGTIRTSDLKKNIKPLELASSFVDAYLDKDLSYPEIGRMTLPTWSQ YVFGESSVALGPFSPFSKLETINIPDSIYEQYNETECKTQMGLFPEIDRVWLTVDNKFCFWNYKNLNDIQTLDEMDKPII SVTLIPPKKKLFIESINYLLVLVTVTDLYIIAMTHDKEHNTIEFFDTGMSVSVKGLDITNVVASSETGRIFMTGDSDGTN VWEVEYSTVETWFKGKCTKVCHTRQYILSSITPSLPTSDISVIEKIPLVGSWIKNHESEKVVSIVIDDSRNLLYTLSNLS TIRMYYMDPKKSDLSLRYTYTTSQILSNLKMIPPSQDSSIQPPGMQNPKNFSIVSISPISQKESSLLNLVAVTSSGFRIY IKAANTSSESGPPTTMQAIQQRFPPVSGQGNTNVLSSTKRLSKVFPPGYFFGVVPSSPEGTSDKVFVAAPDSGKIIHQMA PGSNTLYFENACFLETEGFVHDIDILNSPLTPDVTYKDKIANESRIQYTVPNPRVAILTNTGIHIFVRKYPYQIFEELGQ NIRPFFEFYGRTETCATALSIASQQSKFSLIETEFASKVYIELGGKPHVKVDDEGTYSLSPSTNNYSVFGQLNSGGIKNA NLALPGFSGSDASDLIRLSGRFDGLATYISRVISPIWQKHLFFVKGISKINDKQSIKQFSHNFNKKVLENIQITLGQISD YLGKNRAFIDGLSGQPNNLIMSGGRFEEISLQAEHRGLHSLVQLITSMREGLAFLSLLADESSKTQEGLESITKFLPDNI RQKLESLTFKLFFTTPEGKEVAKELITCLVNRNVNEGGSVDSISSILQDRCVSYCSADDVVIYKALECLHKAESLDLDSR IQKLNESLRLFQKAASSIPFDVLKDSLNLFASLKFYPGAVELALTVAQQEDRGNLAIGYIHDDKPAKDPRQEYFEKRLRV YELIFNILDIADQRANEFTTSLQDQPSTNLEVEEQGNWNSAIYLRDQAYAVCTSSNDEVFHYCFYDWLISKGFADRLLSI DTQFIQSYLEIKAKSDISIANLLWNYYNRRQLFYNAAEVLLGLAKSNFNLTLSQRIEYLSRAKSYCGCPSFPEDRRSSIQ LEKAVQDYLDIAIIQDEILKRVQEDDMFDEEKKISVIESLSGQLLDISTLFNNYVRPLEYHDISIKIFYTTDYKGTEEIN NCWSKLIMSEHAKALDQGIRPYELIAQTVQELGQYVMLSEVVFPSEFLISKLESYTVEYAPDSPEGWIVEIFLNSGLGYE DLFYIFKDLVDRREYPFDEKVAFSRLVSDVVYLLQKWSNESRLSTLANHVSLDFVRLLESVVGKKPLIKIQSYLESQSR
GO term prediction
Biological Process
None predicted.
Molecular Function
GO:0005515 protein binding
Cellular Component
None predicted.