Protein

MCA_01214_1

Length
781 amino acids

Gene name: HDA1

Description: Histone deacetylase HDA1

Browser: contigA:3838512-3840858-

RNA-seq: read pairs 1371, FPKM 21.7, percentile rank 43.5% (100% = highest expression)

Protein function

Annotation:HDA1Histone deacetylase HDA1
KEGG:K11407HDAC6 histone deacetylase 6 [EC:3.5.1.98]
EGGNOG:0PHNXHDA1histone deacetylase
SGD closest match:S000004966HDA1Histone deacetylase HDA1
CGD closest match:CAL0000201463HDA1Histone deacetylase HDA1

Protein alignments

%idAln lengthE-value
MIA_00343_178.02%7460.0MIA_00343_1
A0A0J9XJT9_GEOCN80.37%6420.0Histone deacetylase OS=Geotrichum candidum GN=BN980_GECA23s00153g PE=4 SV=1
A0A167DI36_9ASCO53.95%7470.0Histone deacetylase OS=Sugiyamaella lignohabitans GN=HDA1 PE=4 SV=1
UniRef50_A0A167DI3653.95%7470.0Histone deacetylase n=1 Tax=Sugiyamaella lignohabitans TaxID=796027 RepID=A0A167DI36_9ASCO
A0A1E3PDP5_9ASCO56.38%6350.0Histone deacetylase OS=Nadsonia fulvescens var. elongata DSM 6958 GN=NADFUDRAFT_71779 PE=4 SV=1
Q6C4P0_YARLI55.13%6530.0Histone deacetylase OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=YALI0_E24893g PE=4 SV=1
A0A060T6R8_BLAAD58.19%6530.0Histone deacetylase OS=Blastobotrys adeninivorans GN=GNLVRS02_ARAD1B21406g PE=4 SV=1
HDA1_YEAST53.14%6530.0Histone deacetylase HDA1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=HDA1 PE=1 SV=1
HDA1_CANAL48.10%7110.0Histone deacetylase HDA1 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=HDA1 PE=1 SV=1
A0A1E4TG55_9ASCO49.36%6240.0Histone deacetylase OS=Tortispora caseinolytica NRRL Y-17796 GN=CANCADRAFT_64770 PE=4 SV=1

Mitochondrial localization by mitoprotII

Probability of mitochondrial location: 0.0696

Protein family membership

Domains and repeats

  1. Domain
1 100 200 300 400 500 600 700 781

Detailed signature matches

  1. Family IPR000286
    Histone deacetylase superfamily
    1. PR01270 (HDASUPER)
  2. Family IPR017321
    Histone deacetylase class II, yeast
    1. PIRSF037919 (HDAC_I...)
  3. Domain IPR023801
    Histone deacetylase domain
    1. G3DSA:3.40.80...
    2. PF00850 (Hist_deacetyl)
  4. Domain IPR019154
    Arb2 domain
    1. PF09757 (Arb2)
Unintegrated signatures no IPR
Unintegrated signatures
  1. SSF52768 (Arginase/...)
  2. mobidb-lite (disord...)

Protein sequence

>MCA_01214_1
MASVNVSNSTETPQGQTKSNETPSSNTVKVDSDGDLPMKDENEETNSKACNSSEVQPEGQKIKKENNDAIEAEGNDLKRK
HKDIAKDSAPADSKELKNSISTTTTANYYNHTQINGKIVETTQPQLIYVPLKTGYCYDVRMRYHAKIVTSNFDYVDPHPE
DPRRIYRVYKALAESGIIIDPKLEGLDEVGNLMQKIPIRFATDEEILLVHTPEHLDFIKSTTTMSRDRLIEETEKGDSVY
YNNDSYTSALLSCGGAIEVCRSVVERKVKNAIAIVRPPGHHAEPGNSAGFCLFSNVAVAAKTMLRDYPESVRKILVLDWD
VHHGNGTQRAFYNDPRVMYISLHRYEGGKFYPGTDYGSHTKTGEGAGEGYTINIPWSTGGMGDADYVYAMNRVILPIAIE
YDPDLVIISSGFDAAEGDPIGGYHLTPNAYGYLTHMMKVLANGNLVVVMEGGYNLDSIAKSALAVTKVLIGEIPGRLKTR
VPQKSAVQVISEVVKEQSKYWECIRPGFHAVDFKQTDESTFLPEVIRTYQFKEFFDKYQMTPLPILKDKIQDTIETQILA
TPDIYKQSTVVVIIHDTPEIWADRRPLLGTIDPSQSVMIDASRQVIEWATSHKYGVVDVSVPGIAGINHSSSYSIGASSQ
DLCIYLWDDYLEFFEARKIIFIGIGESYAGIVYLAGHRDLRSRVKALVAFVDEMPLRAIAPVIDEYISDWFYQNSLVFTS
HEHSVWDTSVNPKKPRRKFGRVIRSNSVGTARVVRERFEEAQEYLEEVLETDDEEESSSKE

GO term prediction

Biological Process

None predicted.

Molecular Function

None predicted.

Cellular Component

None predicted.