Protein
MCA_01206_1
Length
311 amino acids
Gene name: YML6
Description: 54S ribosomal protein YmL6, mitochondrial
Browser: contigA:3818540-3819553+
RNA-seq: read pairs 5024, FPKM 199.0, percentile rank 88.0% (100% = highest expression)
Protein function
| Annotation: | YML6 | 54S ribosomal protein YmL6, mitochondrial | |
|---|---|---|---|
| KEGG: | K02926 | RP-L4 | large subunit ribosomal protein L4 |
| EGGNOG: | 0PNBG | YML6 | mitochondrial 54S ribosomal protein YmL6 |
| SGD closest match: | S000004487 | YML6 | 54S ribosomal protein YmL6, mitochondrial |
| CGD closest match: | CAL0000188564 | YML6 | Mitochondrial 54S ribosomal protein YmL6 |
Protein alignments
| %id | Aln length | E-value | ||
|---|---|---|---|---|
| MIA_00515_1 | 60.79% | 278 | 1e-119 | MIA_00515_1 |
| A0A0J9XLD6_GEOCN | 57.84% | 287 | 1e-107 | Similar to Saccharomyces cerevisiae YML025C YML6 Mitochondrial ribosomal protein of the large subunit OS=Geotrichum candidum GN=BN980_GECA32s01594g PE=4 SV=1 |
| A0A060T7C7_BLAAD | 49.63% | 272 | 9e-80 | ARAD1B22638p OS=Blastobotrys adeninivorans GN=GNLVRS02_ARAD1B22638g PE=4 SV=1 |
| UniRef50_A0A1E3QVS1 | 46.21% | 277 | 3e-69 | Uncharacterized protein n=1 Tax=Babjeviella inositovora NRRL Y-12698 TaxID=984486 RepID=A0A1E3QVS1_9ASCO |
| A0A161HJX4_9ASCO | 44.98% | 269 | 2e-71 | Mitochondrial 54S ribosomal protein YmL6 OS=Sugiyamaella lignohabitans GN=YML6 PE=4 SV=1 |
| RL4P_YEAST | 40.30% | 263 | 1e-55 | 54S ribosomal protein YmL6, mitochondrial OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YML6 PE=1 SV=1 |
| A0A1E3PJ40_9ASCO | 39.51% | 286 | 6e-56 | Ribosomal protein L4 OS=Nadsonia fulvescens var. elongata DSM 6958 GN=NADFUDRAFT_47013 PE=4 SV=1 |
| A0A1E4TDG2_9ASCO | 50.61% | 164 | 4e-50 | Uncharacterized protein OS=Tortispora caseinolytica NRRL Y-17796 GN=CANCADRAFT_32906 PE=4 SV=1 |
| Q6C573_YARLI | 39.10% | 266 | 3e-49 | YALI0E20493p OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=YALI0_E20493g PE=4 SV=1 |
| A0A1D8PQQ9_CANAL | 35.88% | 262 | 4e-47 | Mitochondrial 54S ribosomal protein YmL6 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=YML6 PE=4 SV=1 |
Mitochondrial localization by mitoprotII
Probability of mitochondrial location: 0.9665
Predicted cleavage: 26
Protein family membership
- Ribosomal protein L4/L1e (IPR002136)
Domains and repeats
-
Domain
1
50
100
150
200
250
311
Detailed signature matches
no IPR
Unintegrated signatures
-
mobidb-lite (disord...)
Protein sequence
>MCA_01206_1 MLRNTLLSLSRRVPSRSLATSCKPEMTLEKAASLVSSRVAEPPKYLLASARSFPDLEPQTVFPVSTVLLGEPLRRDILWR AVVFEADASRVGSSNTRSRAEMGYSNKKLRPQKGSGKARMGSRGSPTRHDGGRAFARHAPFDWSTDLPRQIYFKAIRVAL SHIYRQGRLFVLDDGVQADFVTSHSFAGKLFVAAHGKKQLPTDLSEFEELPKDEFTETERERLAKRKASIAKVKKNTDTA DLGNVLVIPTEFRENLHEATAEKFGTKIEIIPAEAIEVRDLLKAHTVIVEKEALKFLGETFQPDEPIPTVC
GO term prediction
Biological Process
GO:0006412 translation
Molecular Function
GO:0003735 structural constituent of ribosome
Cellular Component
GO:0005840 ribosome