MCA_01190_1

Browser: contigA:3769360-3771607-

RNA-seq: read pairs 6, FPKM 0.1, percentile rank 3.5% (100% = highest expression)

Protein alignments

Mitochondrial localization by mitoprotII

Probability of mitochondrial location: 0.1735

Protein family membership

None predicted.

Domains and repeats

Detailed signature matches

no IPR

Unintegrated signatures

1. NON_CYTOPLASM... (N...)
   21 - 748

   PHOBIUS
   NON_CYTOPLASMIC_DOMAIN (Non cytoplasmic domain)
2. SIGNAL_PEPTIDE (Sig...)
   1 - 20

   PHOBIUS
   SIGNAL_PEPTIDE (Signal Peptide)
3. SIGNAL_PEPTID... (S...)
   16 - 20

   PHOBIUS
   SIGNAL_PEPTIDE_C_REGION (Signal peptide C-region)
4. SIGNAL_PEPTID... (S...)
   5 - 15

   PHOBIUS
   SIGNAL_PEPTIDE_H_REGION (Signal peptide H-region)
5. SIGNAL_PEPTID... (S...)
   1 - 4

   PHOBIUS
   SIGNAL_PEPTIDE_N_REGION (Signal peptide N-region)
6. SignalP-noTM
   1 - 20

   SignalP euk
   SignalP-noTM (SignalP-noTM)
7. mobidb-lite (disord...)
   712 - 732

   MobiDB Lite
   mobidb-lite (disorder_prediction)

   431 - 451

   MobiDB Lite
   mobidb-lite (disorder_prediction)

Protein sequence

>MCA_01190_1
MKIMACALTVFAASIHTIYAASIYDTSVAGSGINKRELPEVFSSRILGPVERLVLLFDSFLPLVTLNFDLSEFPSLSYFF
DPKRLALSLEAQRKNEAIKYDRLNYLEFLERFNSTMQKMRLKANNGFSHIQKSSEKEPETAPHLFFQFPADPNTSNNIKS
YSDGANFDRFPNDLSNFWKGVKRHPKVQKFVENFSLKIMAKVLDLLQQEPSFVASKKASISQTKISLDILLDIVSQEVLP
LTLLLNSNHDSNIFENADLESGDNGDSAEIQKQATIVTPAQYLSEQDFIGLAAELETENNSEKNTVWSGLVDTFTDIMVV
SYMLGHVYSGSYMKDGIQFGGFSPKEPEPGLIQPVVTKAKGFALGTLLGGVWGTYIGYESLKDAQSKSSAFKGKTRLMFG
AAVGNILGTACGGLGSLTTLSDIDSISWFESNEESNDDDNDDGNDEYQDDYKDENKCENISTLVENNLLFWKLQQFVLES
ATNFKLLDQEKNPLFAPSGSIYKERHINKSIKSCFQAESSLSLNNNSYNSGPSSLFFNFSKSTYGNPFSVSARIKMWESE
YVNDLIESFTIAIPQKVTLYKKANSTARKSSKEHSMVWKVLIEKADLTQEDRNEDSHGNDNFQKSLRQPIYIRFRYHVGN
LKSVPVPISLAVNSSYKVLAFEVVSTNFNSFSDRSKVEEDDSLFSDGEIIDISEGEDAGSGSELFPTVRVEKERAKGHVR
SEEKRPTKTKKVTTNNSNEYILKWKLLF

GO term prediction